Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq319 172 7e-38 >seq319 Length=25483 Score = 172 bits (190), Expect = 7e-38 Identities = 1130/1778 (64%), Gaps = 84/1778 (5%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 ||||| |||||||| || ||||| | || | | |||| | || | |||||| |||| Sbjct 8400 CGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTG 8341 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | ||||| | | ||||| | || | ||||||| |||||||||||| Sbjct 8340 AGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATGAAA 8281 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCT 115736 || ||||| || ||||||||||| | | | ||| | |||||||| |||||| | Sbjct 8280 GCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGAC-GAATTTCCCAAACAGTTTT 8222 Query 115737 GTAGAGGTTCTT--AATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||| |||||| ||| ||||| ||||| | | || ||| || || |||| ||| Sbjct 8221 ATAGA-GTTCTTTCAAT-TCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGC- 8165 Query 115795 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCC 115851 || | |||| | | |||||| || || ||| | ||| | || | |||||||||| Sbjct 8164 -TG-CAATGATTTGGTTCTTCATCTCTGGTGTCCAAATACCCAACTCCATGAGATCCTCT 8107 Query 115852 ACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTG 115911 | | || |||||||||| || ||||| || | || | || || || Sbjct 8106 AGTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTT 8047 Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971 | |||||||| ||||| || ||||||||||| | |||||| ||| || || || ||| Sbjct 8046 GAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGC 7987 Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CG-----TTCCTTG 116025 || ||||| || | || ||| || | || | || || || || ||||| Sbjct 7986 ATTGGTGCAATTAAGAGTGAGTTACGTAAAC---CACCTTTATTGACGATCTTATCCTTT 7930 Query 116026 AGGGC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGAT 116084 | | |||| | || | ||| ||| || | | | |||||||||| | || ||||| Sbjct 7929 AATTCTGTCCAATTCCAACGTGAACTTGGTGT-AACATTCCACATATCATATTGAAGGAT 7871 Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144 ||||| || ||||| || || | || | ||||| || || ||| | |||||||| Sbjct 7870 ACCTTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTC 7811 Query 116145 -GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203 ||| || | || ||| ||| || || ||| || | |||| | | | Sbjct 7810 ATGAG-AGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTAAT---T 7755 Query 116204 TGGCCTCG---TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260 |||| || | ||| || | | ||| ||| || ||||| || | ||||| Sbjct 7754 TGGCAGCGGCAACACTATCGAAAGGCATACGCATTTTAATGAAAACATCTGCTAAACCTT 7695 Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGG 116317 | | ||| | |||||||| |||||||| | ||| || || ||| ||| || | Sbjct 7694 GAATACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGC---CTCGATAACTG 7638 Query 116318 GATAAAAATTCCTATC---GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 ||||| | || | ||| |||||| ||| |||||| |||| | || ||||||| Sbjct 7637 GATAATAGTTACGATCAATGATAAC---ATTAAGATTTACTGTGATTAATTTGGTGATTT 7581 Query 116375 C-ATGAAGCTTT--TCGT--AATCAAAACT------------GCGAGTCTCTTCATTGAC 116417 | | || | || | || ||| ||||| || || | ||||| Sbjct 7580 CAAAGAGGAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGAC 7521 Query 116418 --AT--ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA- 116472 || | || ||||| ||||| || || |||||||| || | | |||| || | | Sbjct 7520 GAATGAATTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCAT-CTGGTGAT 7462 Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 || || | || ||||| ||||| | ||| ||| ||||||| || || ||||||||| Sbjct 7461 GTATATTGAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGA 7402 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || || || | || || |||||||| || | || |||| || || || || ||| Sbjct 7401 TTGGATTTGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGA 7342 Query 116593 GACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTC 116651 || | | ||| || ||| | ||| ||| | | | |||| ||| Sbjct 7341 GATTCCATAATGGCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGT 7282 Query 116652 CT--CCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCT 116709 | | || || || |||||| || | | |||| || || | || ||| Sbjct 7281 GTGGCTTCATATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTGAGTTTCAGCAAGACCT 7222 Query 116710 GGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769 ||||| | | |||||| ||||||| ||| | |||| | || || |||| ||| ||| Sbjct 7221 GGTGCTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAG 7162 Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTG 116828 | || || ||| || || |||| || || | | | | || || | || || Sbjct 7161 ATATCACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTG 7102 Query 116829 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 116888 || | | || | || || | || ||| |||||||| || |||| ||| || || Sbjct 7101 TTTTTCTTG-AGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGC 7043 Query 116889 GATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATAC 116945 | | || || | | |||| | || | || || | || || | || || || Sbjct 7042 AAAGGCACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAAC 6983 Query 116946 GCGAAGCATTGGAATGATACCATCAGATTG-GCCATTTGTCCCCCGAATACGAGACTTGT 117004 ||||||||||| | | ||||| | | | ||||| || || |||||| |||| Sbjct 6982 ACGAAGCATTGGTACCAAACCAT-TGCTAGTACCATTGGTACCACGAATA--TAACTTTG 6926 Query 117005 TG--GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 | || | | | || | | ||||||||||| || || | ||||||||| |||| Sbjct 6925 AGCAGCACGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGC 6866 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGA 117121 ||| | | | | ||||||| |||||||| || || | || ||||| | | || Sbjct 6865 GCATTGTTTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTG-AACTAAGA 6807 Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 | || ||||||||||| ||||||||| || ||||| | ||||||||| || || Sbjct 6806 AACAAGAAGACATTTGTGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAG 6747 Query 117182 TGAA-CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCG 117240 |||| || || | | | | | ||| || | | |||| ||||||||| || Sbjct 6746 TGAATAATTTCTCTGATAAACGT-TTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCA 6688 Query 117241 TGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || ||||| ||||| || ||||| ||||||| ||| || Sbjct 6687 TGGATACCAATTGAAACACGCATCAACATGTGTTGTGG 6650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493610815520