Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=107950 Score = 93.3 bits (102), Expect = 4e-14 Identities = 310/480 (65%), Gaps = 2/480 (0%) Strand=Plus/Plus Query 53641 ACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATACGGCGTTCGCGG 53700 |||||||| | |||||| |||||||||| | || ||||| | | | || | ||| Sbjct 66139 ACCAGGCGGCGATACATCAGGCGGTTGATCATTACGCCATAGTCCAGATGACGAACACGG 66198 Query 53701 TTTTCTTCAGTGCCACGGTTATTCTTCAGTACAACGACGTCATCGAACTGGTA-ATGCCA 53759 || || || |||| ||||||||||||| ||| | | | | | |||| | |||||| Sbjct 66199 TTCTCCTCGATGCCGCGGTTATTCTTCAATACCA-GCAGACTTTCAACTTCCAGATGCCA 66257 Query 53760 CAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGACTTGAG 53819 | |||| | | || ||||| || ||||| |||| ||| ||||| ||||| || || | Sbjct 66258 AATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCAC 66317 Query 53820 CGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGCG 53879 || || | || | || ||||| | ||| ||||| ||||| ||| Sbjct 66318 AGCGGTCTGGAAGTGTTTCAGAAAGGGGATTACGCCAGTGTGGGTGGCTTCTCCATTGCG 66377 Query 53880 AATAGGACTGCCAATCCCACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGTTTGGA 53939 || ||| || | |||| | || | ||| || || || ||||| || Sbjct 66378 GATCTCACTCCCCAATGCACGCAGTCGGCCAAAACCAATCCCAATGCCAGCACGACGCGA 66437 Query 53940 CACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTTTT 53999 ||| || || | |||| || || ||| |||| | || |||| | | | Sbjct 66438 CACGTAATCGATAATGGCAGAGGACGCAGCGCTGATCCCTTTCAAACTGTCTTCGGACTC 66497 Query 54000 GATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAATCGGGGT 54059 ||||| || ||| |||||| || || || ||||| || || ||||| || ||||| Sbjct 66498 AATCAGAACGCAGCTGGAGAACTGGCGCGTCGGGGTACGGACGCCGGCCATGATTGGGGT 66557 Query 54060 GGGAAGACTGAACTTGCCTGTGCTGGCATATTCATAGAACTTCTTCACCATCTCCAGGCG 54119 ||| ||| || ||| ||| |||| ||||||||| ||||||||| ||||| || Sbjct 66558 GGGCAGAGACAATTTGAATGTACTGGTGACGTCATAGAACCCCTTCACCATTTCCAGACG 66617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505480003369920