Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 >seq1 Length=107950 Score = 170 bits (188), Expect = 2e-37 Identities = 201/272 (74%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 41326 ATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACG 41385 ||||| ||| ||||| ||| || ||||| ||||| || ||||||| | ||||| Sbjct 66380 ATCCGCAATGGAGAAGCCACCCACACTGGCGTAATCCCCTTTCTGAAACACTTCCAGACC 66321 Query 41386 GCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41445 || || ||||| || || |||||||||||||| ||||| ||||| || | || || Sbjct 66320 GCTGTGAAATCATGCTCGCAGGGTGGCGTTCGAGGTGGCGCAGCGACGGCTTTCTACCCT 66261 Query 41446 ATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41505 || |||||||| |||||||||| |||||||| |||| |||||||| ||| | || || Sbjct 66260 ATTTGGCATCTGGAAGTTGAAAGTCTGCTGGTATTGAAGAATAACCGCGGCATCGAGGAG 66201 Query 41506 AACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTA 41565 |||||| ||||||| ||||||||||||||| | | ||| |||||||| || | Sbjct 66200 AACCGTGTTCGTCATCTGGACTATGGCGTAATGATCAACCGCCTGATGTATCGCCGCCTG 66141 Query 41566 ATCAATAACGATTACATCACTCTGTTCAGCCC 41597 | ||||| | || || ||||||||||| Sbjct 66140 GTACGCAACGAGAATATTACGCTGTTCAGCCC 66109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42547 GGTTATCTGGCTCACGTAGCGGTTATGCAGAAGTTTGTTGATCAGGCTATCTCTGCAAAC 42606 || |||||| | | || ||| | || |||||||| |||| |||||||| || || ||| Sbjct 65147 GGCTATCTGACCAAAGTTGCGATCATTCAGAAGTTCTTTGACCAGGCTATTTCAGCCAAC 65088 Query 42607 ACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGT--GAAATCTGAAATCATCCTTG 42664 ||||||||||| || || |||||| | | || || || |||| | | |||| Sbjct 65087 ACCAACTATGACCCTACTCGCTTCCCGGGCGACAAGGTTCCAATGATGAAGT--TGCTTG 65030 Query 42665 AAGATCTGCTGTATGCAAACTATTTCGGCATCAAAACGCTGTACTACCACAACACCCGCG 42724 |||||||||| | || | | ||| | || ||||| || ||||||||||| || | Sbjct 65029 AAGATCTGCTCTTCGCTTATCAGCAAGGCGTGAAGACGCTTTATTACCACAACACACGAG 64970 Query 42725 ACGGTGCAGGTGAG 42738 | ||||| ||| || Sbjct 64969 ATGGTGCCGGTAAG 64956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565581072101760