Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq319 291 1e-73 seq274 107 2e-18 seq642 89.7 6e-13 seq36 86.0 8e-12 seq174 82.4 9e-11 >seq319 Length=25483 Score = 291 bits (322), Expect = 1e-73 Identities = 1144/1775 (64%), Gaps = 78/1775 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||||| ||||| || | || ||||||||||| ||||| |||||||||| | Sbjct 6650 CCACAACACATGTTGATGCGTGTTTCAATTGGTATCCATGGCGAAGACATTGATTCTGCT 6709 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | | |||||| | | | | | | | || |||| || || ||||||||| | || Sbjct 6710 ATCAACACATACAA-ACGTTTATCAGAGAAATTATTCACTCATGCCACACCAACCTTATT 6768 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC-AAGGAGG 111789 ||| || ||||||||| ||| |||||||| ||||||| ||| | |||| || |||| Sbjct 6769 CAATGCAGGTACACCATCACCACAAATGTCTTCTTGTTTC-TTAGTTCAAATGAAAGAGG 6827 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||||||| |||| || |||| || | | |||| || | ||||||||| | |||| Sbjct 6828 ATTCAATCGATGGTATCTACGATACCTTGAAACAATGCGCACTCATCTCAAAGAGTGCTG 6887 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGC--CAACAAGTCTCGTATTAGAGGTAC 111907 ||||||| || || | | ||| | | | || | ||| | |||| | ||||| Sbjct 6888 GTGGTATTGGTATTGCCGTTCATAAAATTCGTGCTGCTCAAAG--TTATATTCGTGGTAC 6945 Query 111908 AAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 |||||| | | || ||||| | | ||||||||||| || || || | || || || | Sbjct 6946 CAATGGTACTAGCA-ATGGTTTGGTACCAATGCTTCGTGTTTTCAATGATACTGCTCGTT 7004 Query 111967 ATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCAT 112020 | || | |||| || || ||||| || | | || || || | ||||||| Sbjct 7005 ACGTCGATCAAGGTG---GTGGCAAGAGAAAAGGTGCCTTTGCCGTTTACTTGGAGCCAT 7061 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA------GGTGATGAGG 112074 ||||||| ||| || | || ||| |||| |||||| || ||| | |||| Sbjct 7062 GGCACGCCGATGTCTTTGAATTCATTGA------TCTCAAGAAAAACACTGGTAAAGAGG 7115 Query 112075 AGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 || | | | || || |||| || || ||| | ||| |||| ||| || | | Sbjct 7116 AGATGAGAGCTAGAGACCTTTTCTATGCCCTTTGGGTCAGTGATATCTTTATGGAGCGTG 7175 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 | || | | ||| ||||| |||||||||||||| || | ||||| ||||| | || Sbjct 7176 TCGAACAAAATGGTGATTGGGCTCTCTTTTGTCCAAACGAAGCACCAGGTCTTGCTGAAA 7235 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 | ||| | | || |||||| || || || | | | || | || Sbjct 7236 CTCACTCTGAACAACATCGTGCTCTCTACTTGAAATATGAAG-CCACACCAGGCCTACCA 7294 Query 112255 CGACG----GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310 |||| | |||| ||| | ||| || ||| | | |||||| || ||| Sbjct 7295 AGACGTATAATTAAAGCTCAAGATCTTTGGTTCGCCATTATGGAATCTCAAGTTGAAACT 7354 Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAA--CCAAAAGAGTAATCAAAAGAATT 112368 |||||||||| || | || || || || || || ||||| ||||||||||||| Sbjct 7355 GGTACACCATTCATCTTGTATAAGGATGCTTGCAATGCCAAA--TCCAATCAAAAGAATT 7412 Query 112369 TGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 112428 | ||| || | ||| || || |||||||||||| | ||| |||| ||||| Sbjct 7413 TAGGTACCATTAGTAGTAGTAATCTTTGTACAGAAATCATTCAATATACATCACCAGATG 7472 Query 112429 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC----------------CAAGTAT 112472 | | || || ||||| ||||| || ||||| || || ||| | Sbjct 7473 AAATTGCCGTTTGTAATCTCGCCTCTATCGCACTTCCAAAATTCATTCGTCAAAAAGCAG 7532 Query 112473 GTGGATCCAGAGACAAAGA-----CATTTGATTATGAAAAACTCCACGAAGTTACGAAAA 112527 || | ||| ||||| |||||| || || ||| ||| | || ||| Sbjct 7533 GTTCAACCAATCCAAAAGAGTTTGAATTTGACCATCAATTCCTCTTTGAAATCACCAAAT 7592 Query 112528 CTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTG 112584 ||||| ||| || || | |||||| | || | ||| || ||| ||| | Sbjct 7593 TAATCACAGTAAATCTTAATGTTATCATTGATCGTAACTATTATCCAGTTATCGAG---G 7649 Query 112585 CTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 || | || ||| | ||||| |||||||||||| | ||| | |||||| | || |||| Sbjct 7650 CTAAAACCTCAAATCTTAGACATCGTCCAATTGGTATTGGTATTCAAGGTTTAGCAGATG 7709 Query 112645 TATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGT 112703 | |||||| || | || ||| ||| | | || || | |||| Sbjct 7710 TTTTCATTAAAATGCG-TATGCCTTTCGATAGTGTTGCCGCTGCCAAATTAAATGTTGAA 7768 Query 112704 ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGAT 112763 || ||| || || ||| ||| ||| | || | || ||||| | |||| Sbjct 7769 ATCGCTGAAACCATTTATTTCGCTGCTTTAACAGCCTCTCATGAATTGGCCGTTCGTGAT 7828 Query 112764 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 112823 ||||| |||||| | || | || || |||||||| |||| | ||||||| ||||||| Sbjct 7829 GGTCCTTATGAATCTTTCCAAGGCTCACCAGCTTCTAAAGGTATCCTTCAATATGATATG 7888 Query 112824 TGGGAAGGTGAGACCAAGCTTCAC-TACGACTGGGAC-GCTCTCAAGGA-ACG--CATCA 112878 | |||| || | |||||| ||||| | || | |||| | | ||||| | | | ||| Sbjct 7889 T-GGAATGTTACACCAAG-TTCACGTTGGAATTGGACAGAATTAAAGGATAAGATCGTCA 7946 Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938 | | ||| | |||||| || || || |||||||||||||| || || || | Sbjct 7947 ATAAAGGTGGTTTACGTAACTCACTCTTAATTGCACCAATGCCAACCGCTTCAACAAGTC 8006 Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAA 112998 ||||| | ||||| |||||||| |||||||| ||||| | || || || | | Sbjct 8007 AAATCCTTGGTAACAATGAATGTTTTGAACCATACACTTCAAATATTTACAGTCGTCGTG 8066 Query 112999 CCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTG 113058 | || || || || |||||||| || || | | || || |||| ||| | | Sbjct 8067 TTTTAGCTGGTGAATTCACAATTGTCAATAAACAATTACTAGAGGATCTCATGGAGTTGG 8126 Query 113059 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 113118 || | ||| | || |||||| | | || | ||| |||||||||||||| | Sbjct 8127 GTATTTGGACACCAGAGATGAAGAACCAAATCATTGCAGCACGTGGTTCCATTCAATCCA 8186 Query 113119 TTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGA 113178 ||| | || || |||||| | || | | || || ||||||||||| | | Sbjct 8187 TTGGTGGCATCCCTGATGAATTGAAAGAACTCTATAAAACTGTTTGGGAAAT-TCGTCAA 8245 Query 113179 AGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATG 113237 || | | ||||||| |||||||| ||||||||| ||||| |||||||| |||||| | Sbjct 8246 AGAACTCTCATTGATATGGCCGCTGATCGTGGTGCTTTCATCGATCAAAGCCAAAGTTTC 8305 Query 113238 AATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 ||| | ||||| | | ||||| | |||| ||| | |||||||| | ||| ||| Sbjct 8306 AATGTTTTCATTGCAGAACCAACCTTTGCCAAACTCACCTCTATGCATTTCTACTCATGG 8365 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 | ||| ||| | || || || ||||| || ||||| Sbjct 8366 AGGAAAGGTTTAAAGACTGGTATGTACTATCTCCG 8400 >seq274 Length=24667 Score = 107 bits (118), Expect = 2e-18 Identities = 263/395 (67%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 13598 CTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGGA 13657 ||| ||||| || | || || | | |||||||||| | ||| |||||| ||| Sbjct 260 CTACCAAGCTTCAACCTCTGAATTATATGGTAAGGTTCAAGAGATTCCACAATCAGAGAC 319 Query 13658 GACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGT 13717 ||||| ||||| ||||| || |||| || |||| || ||||| |||| Sbjct 320 CACACCATTCTATCCACGTTCACCATACGCTGTAGCAAAACAATATGCCTATTGGATCGT 379 Query 13718 AAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCATGA 13777 || || || ||| | |||| ||| ||||| || ||| | ||||||||||| Sbjct 380 TGTAAACTATCGTGAGGCATACGATATGTACGCATGTAATGGTATCTTATTCAACCATGA 439 Query 13778 ATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAGG-GTATCAAACAA 13835 |||||| | ||||| || |||||| || | ||||| || || || | | Sbjct 440 ATCACCACGTAGAGGTCCAACCTTTGTAACTAGAAAGATCACTCGTTTCGTTGCTGGTAT 499 Query 13836 ATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATTGG 13895 |||| ||| || | || || | | |||||||| || ||||| | | |||||| Sbjct 500 TGCATGT--GGTAAAGATGAAATCCTCTACTTGGGTAATATTAACGCTAAACGTGATTGG 557 Query 13896 GGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCGAC 13955 |||||||| | ||||| || ||||| |||||| | ||| | ||||||||| || | || Sbjct 558 GGTCACGCCAGAGACTACGTCGAAGCAATGTGGTTAATGTTACAACAAGAGAAACCAGAA 617 Query 13956 GAATATGTAGTAGCAACGGGTGAGACCCATTCAGT 13990 || | || | || || ||||| || |||||||| Sbjct 618 GATTTCGTTATCGCCACTGGTGAAACTCATTCAGT 652 >seq642 Length=17076 Score = 89.7 bits (98), Expect = 6e-13 Identities = 326/502 (65%), Gaps = 15/502 (3%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 ||| || | ||| || | ||| | || | ||| | |||||| | ||| |||||||| Sbjct 10887 ATCGAATCTACCAGGTCTAAGTAATGCTTTATCCAAGATATCGGGTCTATTGGTTGCGGC 10946 Query 15947 GATGACAACAATACCTGTTTCGTTA--TCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | || |||| | | |||| | | ||||||||||| || ||| | ||||| Sbjct 10947 AAGCACCACAA--CGTTTTTCAATGGTTTGAAACCATCCATTTCAACCAACAATTGGTTC 11004 Query 16005 ATAGTTTGTTCCCGTTCATCATTCG---CTGGCATACCACCAGCACTGCGTTGCTTTCCC 16061 | || | || |||||||| || | | | | |||||| || | | ||| | || Sbjct 11005 AATGTATTCTCACGTTCATCGTTTGAACCAGAGAAACCACCTTTACCTC-TAGCTCTACC 11063 Query 16062 A-CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 16120 | | ||||| || ||||||||||| || || |||||| ||| | | ||| |||||| Sbjct 11064 AACAGCATCGATTTCATCAATGAATACAATACATGGTGCATTCTTTCTAGCTTGTTCAAA 11123 Query 16121 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCG 16178 | ||| | ||||| | || ||||||||||||||||| || || | || | | Sbjct 11124 TAAATCTCTAACACGTGATGGACCAACACCAACAAACATCTCTACGAAATCTGAACCACT 11183 Query 16179 GAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237 | ||| || ||| || ||||| | ||||| || ||||| || | | || || Sbjct 11184 G---GTTGAATAGAATGGTACATTTGCCTCACCAGCTGTGGCTTTAGCAATCAATGTTTT 11240 Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAA 16297 ||| |||||||| || | | | ||||||| ||| ||||| || ||| | || Sbjct 11241 ACCAGTACCTGGTGGTCCTACTAAAATTGCACCTCTTGGTATCTTTGCACCAATGTCATG 11300 Query 16298 GTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTC 16357 | || ||| || | ||| | ||| | |||| ||||| | ||| |||| || | | Sbjct 11301 GAATTTCTTTGGATTCTTTAAAAAGTTTACAAATTCTTCAATCTCAACTTTAGCTTCACC 11360 Query 16358 AATCCCCTCAACATCGGTAAAC 16379 || || | ||||| ||||| Sbjct 11361 AAGACCTGCTACATCACTAAAC 11382 >seq36 Length=55639 Score = 86.0 bits (94), Expect = 8e-12 Identities = 120/168 (71%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 176614 TGTATAGAATGACTTGGATTGAG---AACCTTTGGATGCCTTGATAATTGGTGTCACCAT 176670 |||| |||||||||| ||||| ||| ||||| |||||| ||||||||||| || | Sbjct 15224 TGTAAAGAATGACTTCTTTTGAGTTGAACTTTTGGTTGCCTTTATAATTGGTGTAACAAA 15165 Query 176671 GGACACAACAAAACCCAACTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAAT 176730 | || ||||| || | |||| ||||||| ||||| ||||| | ||||| || Sbjct 15164 TTCTTCTACGAAACCACGTTTCAAAAGAGTTGGCCAAAAGTAATGAATGAAATTGATAAC 15105 Query 176731 GAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCAT 176778 | ||| || || || ||||| || | ||| ||| | ||| ||||| Sbjct 15104 TAAACCTTTTATATGCGAACCATCATGATCTTGATCAGCCATAATCAT 15057 >seq174 Length=33651 Score = 82.4 bits (90), Expect = 9e-11 Identities = 195/288 (68%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 ||| | |||||| || | |||||| ||||| | || ||| | | |||| ||||| Sbjct 12536 GATTTGACGATCGAATCTACCTGGACGAAGTAATGCTGGATCCAATACATCACTACGATT 12595 Query 15938 CGTTGCGGCGATGACAACAATACCTGTTTCGTTAT--CAAAACCATCCATCTCTGTCAAA 15995 || | |||| ||||| | ||| | ||| | |||||||||||||| ||| Sbjct 12596 GGTACCAGCGAATACAACCACACCAGAG--GTTGAGGCGAAACCATCCATCTCGACCAAT 12653 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 16055 | || || | || | || | |||||||| ||| | ||||||| | |||| Sbjct 12654 AATTGATTCAATGTATTCTCTCTCTCATCATTA--TGGAA-ACCACCACGTGATC-TTGC 12709 Query 16056 TTTCCCA-CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 | | ||| | ||||| || ||||||||||| || ||||| ||| |||| | || || | Sbjct 12710 TCTACCAACAGCATCGATTTCATCAATGAATACAATGCAAGGTGTATTTGCACGTGCTTC 12769 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTC 16162 || ||||||||| | ||||| | || |||||||||||||| || Sbjct 12770 TTTAAAGAGATCTCTAACACGAGATGGACCAACACCAACAAACATTTC 12817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728650555840