Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq319 167 3e-36 >seq319 Length=25483 Score = 167 bits (184), Expect = 3e-36 Identities = 689/1069 (64%), Gaps = 52/1069 (5%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| |||||||| || || | ||| | |||||| ||| | |||||| || | | Sbjct 8400 CGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTG 8341 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCA-TAAACAAGTTCATCGACTGAGACT--GATCGATG 109524 ||||||| || || || ||| || | || | || | ||| | || |||||||| Sbjct 8340 AGTTTGGCAAAGGTTGGT-TCTGCAATGAAAACATTGAA--ACTTTGGCTTTGATCGATG 8284 Query 109525 AATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTC 109584 || |||||||||||| ||||| || |||| | |||| | ||||||||| ||||| Sbjct 8283 AAAGCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGAATTTCCCAAACAGTT 8224 Query 109585 TTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644 || || | | || | ||||| || ||| | | ||| |||||| || |||| || Sbjct 8223 TTATAGAGTTCTTTCAATTCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGC- 8165 Query 109645 TTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCA 109701 | || |||| | | |||||||||| | ||| | ||| | || ||||||| || Sbjct 8164 TGCA--ATGATTTGGTTCTTCATCTCTGGTGTCCAAATACCCAACTCCATGAGATCCTCT 8107 Query 109702 ACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTA 109761 | | || || ||||| | ||||||||||| | || || ||| || || Sbjct 8106 AGTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTT 8047 Query 109762 GTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGC 109821 | ||||| ||||| ||||| |||||||| || |||||||| || ||||| || ||| Sbjct 8046 GAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGC 7987 Query 109822 ATGGGAGCCATGAGAAGACTGTTTCGGAGAC--CCTTCGTCTTTACCCGCTCACGCATTG 109879 || || || || | || ||| || | || |||| | || || || | | || Sbjct 7986 ATTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTT--TATTGACGATCTTATCCTTTA 7929 Query 109880 CGTC---CCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 || ||||| |||| | || || || | | ||| ||||||||| ||||| Sbjct 7928 ATTCTGTCCAATTCCAACG-----TGAACTTGGTGT-AACATTCCACATATCATATTGAA 7875 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | ||| | || ||| || || || | |||| || || | || ||| |||||| Sbjct 7874 GGATACCTTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCA 7815 Query 109997 ACTCGGATGA-AGCCT-CTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCA-TTCA 110053 | || |||| || || || || || ||| || || ||| || | | || || | Sbjct 7814 ATTC--ATGAGAGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTAA 7757 Query 110054 TGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGAC 110113 | ||| || | ||| ||||| || | || ||| || ||||| |||| || Sbjct 7756 TTTGGC-AGCGGCAACACTATCGAAAGGCATACGCATTTTAATGAAAACATCTGCTAAAC 7698 Query 110114 CCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGG 110173 | |||| ||| | |||||| || ||||| | | || ||| | ||| || | Sbjct 7697 CTTGAATACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGCCTCGATAACTG 7638 Query 110174 GGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCAT 110233 | ||| |||| || || |||| ||| ||||| || | || ||||||||| Sbjct 7637 GATAATAGTTACGATCAATGATAACATTAAGATTTACTGTGATTAATTTGGTGATTTCAA 7578 Query 110234 GGA------GTTTGTCGTAATCGAACGTTTTCG-----------TCTCCTTATTGAC--A 110274 || | | ||| | || ||| ||| | || ||| ||||| | Sbjct 7577 AGAGGAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAA 7518 Query 110275 T--ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332 | |||| || || || ||||| || ||||| || || | | | || ||| || | Sbjct 7517 TGAATTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGTAT 7458 Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392 ||| | ||||| ||||| | || ||| ||||| ||| || ||||| ||||| | Sbjct 7457 ATTGAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGG 7398 Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTC 110441 |||||| ||||| ||||||||||| | ||| |||| ||||||||||| Sbjct 7397 ATTTGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTC 7349 Score = 107 bits (118), Expect = 2e-18 Identities = 228/338 (67%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATA 110943 |||||||||||||| || | ||| || |||| || | | | | ||| | || ||| Sbjct 6900 ATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATTGTTTCAAGGTATCGTAGATA 6841 Query 110944 CCATCAATCGAATCTGCCTTG-TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 ||||| || ||||| | || || | | | ||||| ||||||||||| || || || Sbjct 6840 CCATCGATTGAATCCTCTTTCATTTGAACTAAGAAA-CAAGAAGACATTTGTGGTGATGG 6782 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTT 111062 || || |||||||| | || ||||| |||||| |||| | | || | || Sbjct 6781 TGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAATAATTTCTCTGATAAACGTTT 6722 Query 111063 GTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAA 111122 |||||||| || || || | |||| || || |||||||| | ||| ||||| || Sbjct 6721 GTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGATACCAATTGAAACACGCATCAA 6662 Query 111123 CATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAG 111182 ||| | ||| || ||||| | || ||| ||| ||| ||||| || || | Sbjct 6661 CATGTGTTGTGGACGTTCGACGATTTTGCCACCAATACGATGAAGATAGGAACGTTCCAA 6602 Query 111183 GGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGAT 111220 || |||| |||||| | || ||||||||||||||| Sbjct 6601 TGTTTTGAATCCAAAGAAATCATAATCGAAATCACGAT 6564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588962954181600