Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq319 223 4e-53 seq274 113 5e-20 seq642 95.1 1e-14 seq1107 84.2 3e-11 seq174 82.4 9e-11 >seq319 Length=25483 Score = 223 bits (246), Expect = 4e-53 Identities = 1174/1841 (64%), Gaps = 60/1841 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 |||||||||||||| || ||||| | |||| |||| | ||| | ||||||||| | | Sbjct 8400 CGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTG 8341 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 || |||| | ||||| | | ||||||| ||| | |||||| || || || ||||| Sbjct 8340 AGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATGAAA 8281 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTGATTTCCCACACTGTGCG 105768 |||||| | || ||||||||||||| | | ||| | |||||||| || || Sbjct 8280 GCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGA-ATTTCCCAAACAGTTTT 8222 Query 105769 GTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTT 105828 ||||| | || | ||||| ||||| | || |||||| ||||| | || | Sbjct 8221 ATAGAGTTCTTTCAATTCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGC--T 8164 Query 105829 GACCATGA---GATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGAC 105885 | | |||| | | |||||| || | ||||| ||| | || | ||||||| | | Sbjct 8163 G-CAATGATTTGGTTCTTCATCTCTGGTGTCCAAATACCCAACTCCATGAGATCCTCTAG 8105 Query 105886 GAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGT 105945 | || || |||||||| || || || || | | | || || || | Sbjct 8104 TAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTTGA 8045 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| |||||||| |||||||| ||||| | |||||| || || || |||||||| Sbjct 8044 AGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCAT 7985 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATG--CGT-TCCTTGAGAAC 106062 |||||| || || || |||||| | ||| || |||| | | | ||||| | | Sbjct 7984 TGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAATTC 7925 Query 106063 A-TCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 ||| | || | ||| |||||| | || |||| |||||||| ||||||| | |||| Sbjct 7924 TGTCCAATTCCAACGTGAACTTGGTGTAACATTCC-ACATATCATATTGAAGGATACCTT 7866 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181 || | || || || | || | ||||| | ||| | | ||||||||| Sbjct 7865 TAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTCATGAG 7806 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 || | | ||| ||| ||||||||| ||| | |||| | | || Sbjct 7805 AGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTAATTTGGCAGCGG 7746 Query 106242 CATCTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 || | ||| ||| || || || ||| || ||||| || | |||||||| ||| Sbjct 7745 CAACACTATCGAAAGGCATA-CGCATTTTAATGAAAACATCTGCTAAACCTTGAATACCA 7687 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAA 106357 | |||||| || | |||| | ||| || || || ||| ||| |||||| | Sbjct 7686 ATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGC---CTCGATAACTGGATAATAG 7630 Query 106358 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT----GAAG 106413 || | ||||||| || |||||| || | | || ||||||||| ||| Sbjct 7629 TTACGATCAATGATAACATTAAGATTTACTGTGATTAATTTGGTGATTTCAAAGAGGAAT 7570 Query 106414 TTTT--TCATAATCAAA---------AGTGC--GAGTCTCTTCATTGAC--AT--ACTTT 106456 | | ||| | ||||| | || || || | ||||| || | ||| Sbjct 7569 TGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAATGAATTTT 7510 Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 ||||| ||||| || || | ||| ||||| || | ||||| ||| || | | Sbjct 7509 GGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGTATATTGAATG 7450 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||||||||| | || ||| |||| || || ||||||||||| || || Sbjct 7449 ATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTTGGCA 7390 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| |||||||| || | ||| | || || || || || || || | | ||| Sbjct 7389 TTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATTCCATAATG 7330 Query 106637 GCCTTCCACACATCGGCGGCTGGTACAATG-GCGTTGGCCCGTCCCTCC----GCCTCGT 106691 || ||| | ||| ||| | || | |||| | ||| || || | Sbjct 7329 GCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGG--CCTGGTGTGGCTTCAT 7272 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751 | || |||||| || | | ||| | || | ||||||||||| | || Sbjct 7271 ATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTGAGTTTCAGCAAGACCTGGTGCTTCGT 7212 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 |||||| || |||| ||| | |||| | || || |||| ||| || | || | Sbjct 7211 TTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATATCACTGA 7152 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 ||| |||| | || || |||||| | ||| || | ||| ||| || | Sbjct 7151 CCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGTTTT-TCTTG 7093 Query 106872 AC-TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | |||| ||| || | || ||| |||||||||||||| | || || || | | || Sbjct 7092 AGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAAGGCACCT 7033 Query 106931 TTTCGAC-GCC--CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 |||| ||| || |||||| || || || || || | || || || ||||||||| Sbjct 7032 TTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCATT 6973 Query 106988 GGAATAATACCATCTGATTG-ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 || | | ||||| || | | |||||| || || |||||| | || | || | | Sbjct 6972 GGTACCAAACCAT-TGCTAGTACCATTGGTACCACGAATATAACTTTGAGCAGCACGAAT 6914 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 | ||| | | || |||||||| ||||| | ||||||||| | || || | | | Sbjct 6913 TTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATTGTTTCAA 6854 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTG-TTGGCGATAAGGAAGCAACTGGACA 107165 || | |||||||| | |||||| ||||| || || | |||| || ||| |||| Sbjct 6853 GGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAA-CAAGAAGACA 6795 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA-TACCT 107224 | || ||| ||||||||| |||||||| | ||||||||| || ||| |||| | | || Sbjct 6794 TTTGTGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAATAATTTCT 6735 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | | | | | |||||| | | |||||||||||||||| || ||||| || || Sbjct 6734 CTGATAAACGTTT-GTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGATACCAATT 6676 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344 | |||||||| ||||||| ||| || ||| | || ||||| | | || |||||| Sbjct 6675 GAAACACGCATCAACATGTGTTGTGGACGTTCGACGATTTTGCCACCAATACGATGAAGA 6616 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATC 107385 ||| || | ||||||| |||||| || || |||| Sbjct 6615 TAGGAACGTTCCAATGTTTTGAATCCAAAGAAATCATAATC 6575 >seq274 Length=24667 Score = 113 bits (124), Expect = 5e-20 Identities = 264/395 (67%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 6905 CTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGGA 6964 ||| ||||| || |||| || | | |||||||||| | ||| |||||| ||| Sbjct 260 CTACCAAGCTTCAACCTCTGAATTATATGGTAAGGTTCAAGAGATTCCACAATCAGAGAC 319 Query 6965 GACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGT 7024 ||||| ||||| ||||| || |||| || |||| || ||||| |||| Sbjct 320 CACACCATTCTATCCACGTTCACCATACGCTGTAGCAAAACAATATGCCTATTGGATCGT 379 Query 7025 CAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGA 7084 ||| || || ||| | |||| ||| || || || ||| | ||||||||||| Sbjct 380 TGTAAACTATCGTGAGGCATACGATATGTACGCATGTAATGGTATCTTATTCAACCATGA 439 Query 7085 ATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAGG-GTATCAAACAA 7142 |||||| | ||||| || |||||| || | ||||| || || || | | Sbjct 440 ATCACCACGTAGAGGTCCAACCTTTGTAACTAGAAAGATCACTCGTTTCGTTGCTGGTAT 499 Query 7143 ATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATTGG 7202 |||| ||| || | || || | | |||||||| || ||||| | | |||||| Sbjct 500 TGCATGT--GGTAAAGATGAAATCCTCTACTTGGGTAATATTAACGCTAAACGTGATTGG 557 Query 7203 GGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAAGCCGAC 7262 |||||||| | ||||| || ||||| |||||| | ||| | ||||||||| || | || Sbjct 558 GGTCACGCCAGAGACTACGTCGAAGCAATGTGGTTAATGTTACAACAAGAGAAACCAGAA 617 Query 7263 GAATATGTAGTAGCAACGGGTGAGACCCATTCAGT 7297 || | || | || || ||||| || |||||||| Sbjct 618 GATTTCGTTATCGCCACTGGTGAAACTCATTCAGT 652 >seq642 Length=17076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 327/502 (65%), Gaps = 15/502 (3%) Strand=Plus/Plus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 ||| || | ||| || | ||| | || | ||| | |||||| | ||| || ||||| Sbjct 10887 ATCGAATCTACCAGGTCTAAGTAATGCTTTATCCAAGATATCGGGTCTATTGGTTGCGGC 10946 Query 9254 GATGACAACAATACCTGTTTCATTA--TCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311 | || |||| | | ||||| | | ||||||||||| || ||| | |||||| Sbjct 10947 AAGCACCACAA--CGTTTTTCAATGGTTTGAAACCATCCATTTCAACCAACAATTGGTTC 11004 Query 9312 ATAGTTTGTTCCCGTTCATCATTCG---CTGGCATACCACCAGCACTGCGTTGCTTTCCC 9368 | || | || |||||||| || | | | | |||||| || | | ||| | || Sbjct 11005 AATGTATTCTCACGTTCATCGTTTGAACCAGAGAAACCACCTTTACCTC-TAGCTCTACC 11063 Query 9369 A-CGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAA 9427 | | ||||| || ||||||||||| |||||||||||| ||| | | || |||||| Sbjct 11064 AACAGCATCGATTTCATCAATGAATACAATACATGGTGCATTCTTTCTAGCTTGTTCAAA 11123 Query 9428 GAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCG 9485 | ||| | ||| | | | || ||||||||||||||||| || || | || | | Sbjct 11124 TAAATCTCTAACACGTGATGGACCAACACCAACAAACATCTCTACGAAATCTGAACCACT 11183 Query 9486 GAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544 | ||| || ||| || ||||| | ||||| || ||||| || | | || || Sbjct 11184 G---GTTGAATAGAATGGTACATTTGCCTCACCAGCTGTGGCTTTAGCAATCAATGTTTT 11240 Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAA 9604 ||| |||||||| || | | | ||||| | ||| ||||| || ||| | || Sbjct 11241 ACCAGTACCTGGTGGTCCTACTAAAATTGCACCTCTTGGTATCTTTGCACCAATGTCATG 11300 Query 9605 GTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTC 9664 | || ||| || | ||| | ||| | |||| ||||| | ||| |||| || | | Sbjct 11301 GAATTTCTTTGGATTCTTTAAAAAGTTTACAAATTCTTCAATCTCAACTTTAGCTTCACC 11360 Query 9665 AATCCCCTCAACATCGGTAAAC 9686 || || | ||||| ||||| Sbjct 11361 AAGACCTGCTACATCACTAAAC 11382 >seq1107 Length=8415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 25608 ACCAACAAATCCATATTCAGCATCAAAAGCGGCGGCCGAAATGATAGTCCGTTCATA-TA 25666 |||||||||||||||||||||| ||||| | || ||| |||| | || || || Sbjct 7394 ACCAACAAATCCATATTCAGCAAGTAAAGCAGGTGCAGAACATTTAGTTCAATCCTATTA 7335 Query 25667 TAGAATCATTTGATATGAATATCAAAATAATTCGCTGTAATAATGTTTATGGTCCAAATC 25726 || |||||||| | || | | | ||||| | | ||||||| | ||||| ||||| | Sbjct 7334 TA-AATCATTTAAATTGCCTGTAATAATAACTAGAGCTAATAATATATATGGCCCAAAAC 7276 Query 25727 AATACCCGGAGAAACTCATTCCAAAGTTTATAA 25759 |||| || || ||| | || ||||| ||||||| Sbjct 7275 AATATCCTGAAAAAATTATACCAAAATTTATAA 7243 >seq174 Length=33651 Score = 82.4 bits (90), Expect = 9e-11 Identities = 195/288 (68%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 9185 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9244 ||| | |||||| || | |||||||||||| | || ||| | | |||| ||||| Sbjct 12536 GATTTGACGATCGAATCTACCTGGACGAAGTAATGCTGGATCCAATACATCACTACGATT 12595 Query 9245 CGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAAAACCATCCATCTCTGTCAAA 9302 || | |||| ||||| | ||| | || | | |||||||||||||| ||| Sbjct 12596 GGTACCAGCGAATACAACCACACCAGAGGTTGAGG--CGAAACCATCCATCTCGACCAAT 12653 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 9362 | ||| || | || | || | |||||||| ||| | ||||||| | |||| Sbjct 12654 AATTGATTCAATGTATTCTCTCTCTCATCATTA--TGGAA-ACCACCACGTGATC-TTGC 12709 Query 9363 TTTCCCA-CGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 | | ||| | ||||| || ||||||||||| ||||| || ||| |||| | || || Sbjct 12710 TCTACCAACAGCATCGATTTCATCAATGAATACAATGCAAGGTGTATTTGCACGTGCTTC 12769 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTC 9469 || ||||||||| | ||| | | || |||||||||||||| || Sbjct 12770 TTTAAAGAGATCTCTAACACGAGATGGACCAACACCAACAAACATTTC 12817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589967731925280