Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=107950 Score = 98.7 bits (108), Expect = 1e-15 Identities = 258/391 (66%), Gaps = 2/391 (1%) Strand=Plus/Plus Query 137206 CCATAGTCCATATGACGGATACGGTTTTCTTCAATGCCTTTGTTGTTCTTGAGAACAATC 137265 |||||||||| |||||| | |||||| || || ||||| ||| ||||| | || | | Sbjct 66175 CCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCAATACCAGC 66234 Query 137266 AGGTTTTCACATTCTAAGTGCCAGCCAGGCCAGTAACATGTAGCTGAGCCTTTACGAATA 137325 || ||||| ||| | ||||| ||| || || || |||| ||| |||| Sbjct 66235 AGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGAACG 66294 Query 137326 CCACCTTGAGAGCATGAATGTACTCCAGTATTAAAATGCTTCCAGAACGGGG-TCACGCC 137384 ||||| || |||||||| | || | || | || || ||| |||| |||| | ||||| Sbjct 66295 CCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTC-AGAAAGGGGATTACGCC 66353 Query 137385 AGTATGCTTAACTTCACCAGGCCCAATCTTTGAACCTTCTGCACGGATTGCTCCACCTGA 137444 ||| || | |||| ||| | |||| || |||||| | | ||| Sbjct 66354 AGTGTGGGTGGCTTCTCCATTGCGGATCTCACTCCCCAATGCACGCAGTCGGCCAAAACC 66413 Query 137445 AACCCCAATGCCCGCTCGTTTTGACACGTACGAAATAATAGCAGATGATGTTTCATTAAT 137504 || ||||||||| || || |||||||| ||||| ||||| || | | | || Sbjct 66414 AATCCCAATGCCAGCACGACGCGACACGTAATCGATAATGGCAGAGGACGCAGCGCTGAT 66473 Query 137505 CGAGTCCAAGCTATCACCAGATTCAATCAGTACACAAGAACTAAATTGACGTGTTGGTGT 137564 | | ||| || || | || |||||||| || || || || || || || || Sbjct 66474 CCCTTTCAAACTGTCTTCGGACTCAATCAGAACGCAGCTGGAGAACTGGCGCGTCGGGGT 66533 Query 137565 ACGTACTCCGGCCATGATTGGAGTGGGTAGA 137595 ||| || |||||||||||||| ||||| ||| Sbjct 66534 ACGGACGCCGGCCATGATTGGGGTGGGCAGA 66564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511223876140320