Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq641 167 5e-36 seq1199 161 2e-34 seq102 161 2e-34 seq90 158 3e-33 >seq641 Length=13309 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | |||||||||||| || |||||||| |||||||| | |||||| Sbjct 12749 TCTTAATCTGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGAGT 12808 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||||||||| || | || |||||| ||||| ||||| || Sbjct 12809 ACGACCATCTTCCAATTGTTTACCTGCGAAAATCAATCTTTGTTGATCTGGTGGAATACC 12868 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| ||| || || || ||||| | || || ||||| |||||||| Sbjct 12869 TTCTTTATCTTGAATCTTTGTTTTAACATTTTCAATATTATCTGAGCTTTCAACTTCAAG 12928 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || || ||||| || || | |||||| Sbjct 12929 AGTGATAGTCTTACCAGTTAATGTTTTAACAAAGATTTGCAT 12970 Score = 147 bits (162), Expect = 5e-30 Identities = 168/226 (74%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 194915 TTTATCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAA 194974 || |||||||| |||| || ||||| || |||||||| ||||| ||||| | | Sbjct 12979 TTAATCTGAGTACCAAA------TGGAGAGTTGATTCTTTTTGGATATTATAATCAGAGA 13032 Query 194975 GAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAA 195034 |||| | |||||||| | || ||||||||||| || || |||||||| |||||||||| Sbjct 13033 GAGTACGGCCATCTTCCAATTGTTTACCTGCGAAAATGAGACGTTGTTGATCTGGAGGAA 13092 Query 195035 TGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTT 195094 | |||||||| ||||| ||||| ||| || || || ||| |||| || ||| |||| Sbjct 13093 TACCTTCTTTATCTTGGATTTTAGCCTTTACATTTTCGATGTTGTCACTACCTTCAACTT 13152 Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || |||| || || || || | ||||| || || | |||||| Sbjct 13153 CGAGTGTAATGGTTTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 13198 Score = 134 bits (148), Expect = 3e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 194952 TTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGAT 195011 ||||||||| |||||||| | |||||| | |||||||| | || ||||||||||| || Sbjct 12554 TTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCCAATTGTTTACCTGCGAAAAT 12613 Query 195012 AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTC 195071 || |||||||| ||||| ||||| |||||||| ||||| || || || || ||||| Sbjct 12614 GAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTCTC 12673 Query 195072 AATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||| | || || ||| ||||| || |||| || || || || | ||||| || || Sbjct 12674 AATGTTATCACTACCTTCAACTTCGAGTGTAATGGTTTTACCAGTGAGGGTTTTAACAAA 12733 Query 195132 CACTTGCAT 195140 | |||||| Sbjct 12734 GATTTGCAT 12742 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || ||||||||||| |||||||| | |||||| | |||||||| | || Sbjct 13224 TGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCCAATTGT 13283 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTG 195023 ||||||||||| || || |||||||| Sbjct 13284 TTACCTGCGAAAATGAGACGTTGTTG 13309 >seq1199 Length=11192 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | |||||||||||| |||||||| || |||||||| | |||||| Sbjct 956 TCTTAATCTGAGGACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGT 1015 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || || |||||||||||||| ||||| || Sbjct 1016 ACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGAATACC 1075 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| || || || |||||| | || |||| ||| ||||| | Sbjct 1076 TTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATGTTATCTGAACCTTCGACTTCTAA 1135 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | |||||| || || | |||||| Sbjct 1136 TGTGATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 1177 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || || ||||| |||||||| ||||||||||| | | ||| Sbjct 1184 TCTTAATCTTAAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAAAGT 1243 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || || |||||||||||||| || || || Sbjct 1244 ACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGGATACC 1303 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| || || || |||||| | || |||| ||| ||||| | Sbjct 1304 TTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATGTTATCTGAACCTTCAACTTCCAA 1363 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || || ||||| || || | |||||| Sbjct 1364 TGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTGCAT 1405 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || || ||||| |||||||| ||||||||||| | | ||| Sbjct 728 TCTTAATCTTAAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAAAGT 787 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || |||||||| || || | || |||||| ||||| || || || Sbjct 788 ACGACCATCTTCTAATTGTTTACCTGCAAAAATTAATCTTTGTTGATCTGGTGGGATACC 847 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| ||||| ||||| || |||||| | || |||| ||| ||||| | Sbjct 848 TTCTTTATCTTGGATTTTGGCTTTGACATTTTCAATGTTATCTGAACCTTCGACTTCTAA 907 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||||||||| || | |||||| Sbjct 908 TGTGATGGTTTTACCAGTGAGAGTTTTTACAAAGATTTGCAT 949 >seq102 Length=41085 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | |||||||||||| |||||||| ||||||||||| | |||||| Sbjct 382 TCTTAATCTTAAAACTAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCAGAAAGAGT 323 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || | || |||||| ||||| ||||| || Sbjct 322 ACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGAATACC 263 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || || || || |||||| | || || ||| || || | Sbjct 262 TTCTTTGTCTTGAATCTTGGCTTTAACATTTTCAATGTTATCACTACCTTCGACCTCTAA 203 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | |||||| || || | |||||| Sbjct 202 GGTGATAGTCTTGCCAGTGAGAGTTTTAACAAAGATTTGCAT 161 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | || | |||||||||||| |||||||| || |||||||| | ||||| Sbjct 610 TCTTAATCTGAGGACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAGAGAGT 551 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || | || |||||| ||||| ||||| || Sbjct 550 ACGGCCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGAATACC 491 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || |||||| || ||||| | || |||| ||| ||||| | Sbjct 490 TTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATATTATCAGAACCTTCAACTTCCAA 431 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || || | |||||| || || | |||||| Sbjct 430 GGTGATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 389 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | |||||||||||| |||||||| || |||||||| | ||||| Sbjct 838 TCTCAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAGAGAGT 779 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || || |||||||| ||||| ||||| || Sbjct 778 ACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGATCTGGTGGAATACC 719 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || || || || |||||| | || || ||| || || | Sbjct 718 TTCTTTGTCTTGAATCTTGGCTTTAACATTTTCAATGTTATCACTACCTTCGACCTCTAA 659 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | |||||||| || | ||||| || || | |||||| Sbjct 658 GGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAGATTTGCAT 617 >seq90 Length=44396 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | ||| || || || || ||||| || || ||||||| | ||| Sbjct 14427 TCTTAATCTTAAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGT 14368 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| || |||||||| |||||||| ||||| || || || Sbjct 14367 ACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACC 14308 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || |||||||| || ||| |||| |||| ||| ||||| || Sbjct 14307 TTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAG 14248 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || || ||||| ||||| | |||||| Sbjct 14247 AGTGATGGTTTTACCAGTTAAGGTTTTAACGAAGATTTGCAT 14206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109456410607124