Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq550 120 4e-22 >seq550 Length=15469 Score = 120 bits (132), Expect = 4e-22 Identities = 473/740 (64%), Gaps = 47/740 (6%) Strand=Plus/Minus Query 19385 GGGCTGCTCAAGATACTATG-CCATTAGACTGGTCTTTACCTTTGGCCAAAGAACTTACT 19443 |||| || ||| || ||| ||||| || ||| | ||||| ||||| || || ||| Sbjct 14730 GGGCAGCACAACCAACAATGGCCATT-GATTGGGCATTACCATTGGCAAATGATATTAAA 14672 Query 19444 TTATCCGGTAAAGAGACAATTATTTCATTTGGTGGAGCAAGTAACCCAGATATTTCATAT 19503 | |||||| | |||||||||||||||||||||||||| || || || | Sbjct 14671 CCACTTGGTAAAAATGTTATTATTTCATTTGGTGGAGCAAGTAATAGGGAAATCTCTACT 14612 Query 19504 AAATTTTCCATTGATGAATTGGTTCAAACTTACCTTGATGTGATAGAATTATATAATCCA 19563 |||||| ||||| |||||||| |||| || | | ||||| |||| ||| | | Sbjct 14611 TCATTTTCAGTTGATCAATTGGTTGAAACCTATAGTAAAGTGATTGAATCCTATTCTGCC 14552 Query 19564 TCTGGATTAGATTTTGATTTAGAAAATGGTCTGTATGATGCCGAAAAAATAAGTTCA--G 19621 | |||||| || ||||||||||||||||| | ||| ||| ||| || || |||| | Sbjct 14551 TATGGATTGGACTTTGATTTAGAAAATGGCTTATATAATGTCGATAATAT---TTCATTG 14495 Query 19622 CTATT----TCTGTTGTTAAGTCTAAATATCCCAACTGTA-ATATTTCTCTTACACTACC 19676 ||| | || || || |||||| |||| | || | ||| | | ||| | || Sbjct 14494 GCATTAAAAACCCTTATT---TCCAAATAT-CCAAATATACAAATTAGTTTAACAGTTCC 14439 Query 19677 AACAATGCCAACCGGTTTGACAACTGTTGGGTTAAAA---ATTGTCTCAANNNNNNNNNN 19733 |||||||| || ||||| ||||| | |||| |||| | Sbjct 14438 AACAATGCAAAGTGGTTT---AACTGATACTGGAAAAGGTCTTGTTGAAGCTTTTAAAAA 14382 Query 19734 NNNNNNNNNNNATTTTGTGGTCAACGGTATGGCTATGGATTATTATTCTCCAGAAGCAGC 19793 ||||| | ||||| |||||||| |||||||| || | ||| || | Sbjct 14381 AGGAGGATTCAATTTTATCGTCAATGGTATGGCAATGGATTACTA-TAACCAAGAGAA-- 14325 Query 19794 ATTAGATATGGGTAAAGCTGCAATTGAAGCTGCAAAAAGTAT--AGCATCTCAACTAGCC 19851 ||| |||||| |||| || ||| ||||||||| ||||| || | | | ||| Sbjct 14324 ---AGAAATGGGTGAAGCCGCTATTAAAGCTGCAACTAGTATCAAGGA--TTATCTAAAA 14270 Query 19852 AAAGTGTACCCGT------ATGAACCTTTTATATATTCTAAGGTAGGAATAACACCTATG 19905 | | || || | ||| || ||| | | ||||||| ||| || || ||| Sbjct 14269 ACTCTTTATCCATCATTAAGTGACACTGAATTATTTGCAAAGGTAGCAATCACTCCAATG 14210 Query 19906 ATTGGTCTTAACGATGATTTGTCAATGTTTAAATTAAAAGATGCTGTTCTTTTAGGATCA 19965 |||||| | || |||||| | | ||||||| | | ||||| | ||| ||| Sbjct 14209 ATTGGTTTAAATGATGATCTAACTATGTTTACCATTGATGATGCGGCAAAGGTAGCTTCA 14150 Query 19966 TTCCAAAAATTAAATTTTATGGGTTT---------TTGGTCCTTTAATCGAGATAACCCA 20016 || ||||| ||||| ||||| ||| ||| || ||||| ||||| ||| Sbjct 14149 TTTGCAAAATCAAATTCTATGGCTTTCACTTCATCATGGAATTTGAATCGTGATAATCCA 14090 Query 20017 TCATCTTTGGGGCATGTTGACTTACAAACAAGCAGTAATCCAGAACAAAAAGAAAGTGGA 20076 || || || ||||||| ||| | | |||||||| ||||||||| ||| Sbjct 14089 TCTTCATTCTCTTATGTTGATTTAACATCTTCTTCAAATCCAGATCAAAAAGAACCTGGT 14030 Query 20077 GAGTATACTATGACTTTTGT 20096 |||||| | | || ||||| Sbjct 14029 GAGTATTCAAAAACATTTGT 14010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658388616369120