Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 >seq1 Length=107950 Score = 141 bits (156), Expect = 2e-28 Identities = 265/386 (69%), Gaps = 5/386 (1%) Strand=Plus/Plus Query 208527 ACAACGTCATCAAAGACAATGGAAGGATCGTTAACGATGTTCCTGATGATGTGAGTATAG 208586 |||| | |||| ||||||||| ||||| | || || | || ||||| || ||| Sbjct 64323 ACAATGCCATCGAAGACAATGCTCGGATCATCCACCATACCGCGAATAATGTGGGTGTAG 64382 Query 208587 CTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTTTCCAGCTCTGGG 208646 || || ||||| |||||||||||||| ||| || || |||| ||||| |||||||| Sbjct 64383 CTGCGGCTGTGAATGGTTTCAGAGAACGACCATGTTTCCACCCACGTTTCGAGCTCTGGA 64442 Query 208647 ATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATAGAGTCCAGTAGT 208706 || || | ||| || | | ||||||| | || ||||| | || ||||| || Sbjct 64443 ATTGAAATAAGCGGCAGCAGCGTTGCGTTTGGGCTGCGTCCCTGAACGGAATCCAGCAGA 64502 Query 208707 GTCTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTA---AAGCCATG 208763 ||||| || ||||| || | ||| | ||| ||| || ||| | | || || Sbjct 64503 GTCTGGTAACGGAGGTTGCTCAGGAAAATGTGCCGCTCATGCTCTTGCAGCTTAGTATTG 64562 Query 208764 TAGTCAATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGT 208823 | || || || || || | || |||||||| || ||||||||||| || || ||| Sbjct 64563 AAATCGATGCGATCGGTGGTTATGTCGACTTCTTCCGGGCGCCAGAAGAAGGAGAGCTGT 64622 Query 208824 TTCTCAATGAGTTTCTCAAAGATCTC-ATACTTCTGTTGGTCGTAACGAGAAACGTTGAC 208882 || || || || || || || ||| | |||||||| || ||||| || | ||||||||| Sbjct 64623 TTTTCGATCAGCTTTTCGAA-ATCGCGGTACTTCTGCTGATCGTAGCGCGCAACGTTGAC 64681 Query 208883 GTTTTGACCCAGGAACATGTGTTCTT 208908 || || |||||||| | |||| Sbjct 64682 AGACTGCCCGAGGAACATAGGCTCTT 64707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911074219259040