Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 >seq1 Length=107950 Score = 150 bits (166), Expect = 2e-31 Identities = 261/379 (69%), Gaps = 3/379 (1%) Strand=Plus/Plus Query 118118 ATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGAG 118177 ||| | || ||||| || |||||| ||| || || || || |||||||| | Sbjct 64326 ATGCCATCGAAGACAATGCTCGGATCATCCACCATACCGCGAATAATGTGGGTGTAGCTG 64385 Query 118178 CGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCGACCCATGTTTCCAGGGTTGTGTCG 118237 || ||| || || ||| ||||| ||| || || ||||| ||||| || || Sbjct 64386 CGGCTGTGAATGGTTTCAGAGAACGACCATGTTTCCACCCACGTTTCGAGCTCTGGAATT 64445 Query 118238 GACACGATCGGGAGCAGAACTGCATTCGGCCCACGGCCCTGTACAGAATCCAGAAGGATC 118297 || | | ||| ||||| ||| || || | || ||||| || |||||||| || || Sbjct 64446 GAAATAAGCGGCAGCAGCGTTGCGTTTGGGCTGCGTCCCTGAACGGAATCCAGCAGAGTC 64505 Query 118298 TGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG--- 118354 ||||| |||||||| | ||| |||||| ||| || || |||| || | | | Sbjct 64506 TGGTAACGGAGGTTGCTCAGGAAAATGTGCCGCTCATGCTCTTGCAGCTTAGTATTGAAA 64565 Query 118355 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 118414 ||||| || || ||| | || ||||||||||| ||||||||||| | || || || Sbjct 64566 TCGATGCGATCGGTGGTTATGTCGACTTCTTCCGGGCGCCAGAAGAAGGAGAGCTGTTTT 64625 Query 118415 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 118474 ||||||||||| ||||| | | || |||||||| || ||||| | |||||| | | Sbjct 64626 TCGATCAGCTTTTCGAAATCGCGGTACTTCTGCTGATCGTAGCGCGCAACGTTGACAGAC 64685 Query 118475 TCGCCGAGGAACATCGGCT 118493 | ||||||||||| |||| Sbjct 64686 TGCCCGAGGAACATAGGCT 64704 Score = 120 bits (132), Expect = 3e-22 Identities = 701/1098 (64%), Gaps = 62/1098 (6%) Strand=Plus/Plus Query 119103 CCGGCACCAACACTGGCAGCATACCCGCTCCGGATTTCTTGAAGGAAATCGCATCACGAG 119162 |||| |||| || | || || || || |||| || | ||||| | | |||| | Sbjct 65204 CCGGAACCACCATTTTCACAATGCCGTCTTTGGATGATTTCACGGAAACAGGACCACGCG 65263 Query 119163 GTGGCTCAAAACCATTCGTGGAGTTAGTGATCTGGCTGGATGTCTCGCAAGGCATCATCG 119222 | || || | |||||| |||||||| ||||| |||||||| || ||||| |||||| | Sbjct 65264 GCGGTTCGATACCATTTGTGGAGTTGGTGATTTGGCTGGACGTTTCGCACGGCATCTGAG 65323 Query 119223 TGGACAGCGTGGAGTTACGCAGGCCATGAATCGCG-ATATCGACACGCAGCTTTTCCCAG 119281 | ||| || ||||||||||| |||| | ||||| || | | ||||||| |||||| Sbjct 65324 CTGTCAGGGTAGAGTTACGCAGACCAT-ATTCGCGTATGCGGTCGCGCAGCTCTTCCCAA 65382 Query 119282 TCCATCTTCAGTTC------CGCAGTGTGGAGAGCATCCACCTCTTTTTTGTAACGGTCG 119335 ||| ||||| || || | || ||| || | | || |||| |||| Sbjct 65383 GGCATTTTCAGCTCAAAGGACGTATCAGGGTTAGCGTCAAGCGACTTGCGGTAATGGTCA 65442 Query 119336 ATCGGCAGAATGCCCTGAGAGTAAGTTGTCTCGTGGAAGAGATCACATTTGCCCAGTT-- 119393 |||||||| ||||| | || | || | | || |||||| || | || Sbjct 65443 ATCGGCAGCTGTCCCTGGGCATATTTAGTTTGGGAAAACCAATCACA--GGCACCTTTGG 65500 Query 119394 CTTTTGCCAG--GTCAACCGACGCTTCCAGTAGGTAATACTGGAATGCTTCAGCCAGTTC 119451 ||| ||||| | |||| || || || ||||||||||||| |||||| | ||| Sbjct 65501 CTTCCGCCAGCCGGCAAC--TTGCATCAAGCAGGTAATACTGGATCGCTTCAAACGTTTC 65558 Query 119452 GTG-AACAGCGTTAGCTGCACG-AGGGTCGCTGTACTTCATCCCGCGCTTCGCCAGGTAG 119509 || | |||| | | ||| | || || || || | ||| ||||||||| ||| Sbjct 65559 ATGCACCAGC--TGGTTGCCGGCCGGATCAGAATAGTTAAATCCGTTCTTCGCCAGATAG 65616 Query 119510 TACGCGAGGTTGGTCCAGCCAATCCCCAGTGTACGGCGCAGCTT-----GG--TCTTCTC 119562 ||||| || ||||| ||| | |||| |||| || |||| || | | | | Sbjct 65617 TACGCAAGATTGGTAACGCCGACGCCCAAACTACGACG-TGCTTTTGCCGGAATTTCCGC 65675 Query 119563 TGCCGCCAGAACCGGGTAGTTCTGATAGTCCAGCAGTCGGTCCAGAGCACGAACCAGTGT 119622 ||| ||| | |||||| | ||||||||| || || || || ||| |||| | Sbjct 65676 TGCGGCC---ATCGGGTAATCCTGATAGTCGAGTAGGGAATCGAGCGCAGCAACC---GC 65729 Query 119623 ACGGACAGGCTCACGCATGTCTTCCAGCTTCTC----GATCTT-----GCCAAGGTTAAT 119673 | || | || | |||| |||| | || || | | || || |||| Sbjct 65730 ATAGA-ATGC-----AACCTCTTTCAGCGTGTCCAGTGAGCGTAATGCCCCCAGATTAAA 65783 Query 119674 GGCAGACAGAGTACACAGGGCTACCTCGCCCGGGTCTTCTGGATCGTTAATGTCGTTGAT 119733 ||||||||| || || ||||| | ||| || | | || |||| ||| || | Sbjct 65784 GGCAGACAGCGTGCAAAGGGCGATCTCACCATCGGCGTC---ATCGGTAA--ACG-CCAG 65837 Query 119734 CGGATGCGTCGGCAGCGCGATCTCCATACACAGGTTGGACTGCTTCACCGGGGCCTGTTT 119793 ||| | || ||||||| |||||||| || | ||| ||||| | || || || ||| Sbjct 65838 CGGTTTAGTTGGCAGCGTAATCTCCATGCATAAGTTTGACTGGTGAACTGGAGCGACTTT 65897 Query 119794 AGGGTCAAACGGGCTGTTGGTATTACA-GTGGTCAACGTGCTGAACATAAATACGACCAG 119852 || || || | || | || | | || ||||||||||| | || ||| | || || | Sbjct 65898 CGGATCGAAGGCGCCG-TGTTCGTTCATGTGGTCAACGTTCGCAATATACACGCGGCCGG 65956 Query 119853 TTTGTGAACGCTCCTGCCCAAAGACAGAGAATGCGTCCGCCGCAGGGATAGACTTCTTCG 119912 | | || |||||| | | ||||| || | || || | || ||||| Sbjct 65957 TAGAGGCTCGTTCCTGCATCAGGGTTGAGAACAGATCAACAGCGGGAACGGATTTCTTGC 66016 Query 119913 CCACGGAAGGATCTGCTTCCAGTTCCTCGTAAAGCTGTTGGAATTTCTCCTGATCAGAGA 119972 | | ||| ||||| || | ||| ||| || |||||| ||||||||| | Sbjct 66017 GAATGCTCTCATCAGCTTCATATTGCAGGTACAGCGCTTCGAATTTGTCCTGATCAACAA 66076 Query 119973 AGAAATATTCGTACAGCTTACCGCCAGCCACGTTCGGATGGAACAACGTGATGTTCTTGC 120032 ||||| || || ||| ||| | | | | ||| ||||| ||| || |||| | Sbjct 66077 AGAAAGCATCATAGAGC--CCCGGTA-CATCATGCGGGCTGAACAGCGTAATATTCTCGT 66133 Query 120033 CCTGCTGGAGGCGGGTATAAAGCAGCTTGTTGATCTGGAGGCCGTAGTCCACATGGCGAG 120092 | |||||| ||| | ||| ||||||| | ||| ||||||| ||| ||| Sbjct 66134 TGCGTACCAGGCGGCGATACATCAGGCGGTTGATCATTACGCCATAGTCCAGATGACGAA 66193 Query 120093 CACGAGTGCT-CTCGGTGCCACGGTTGTTCTTCAGAACGATCAGGCTCTCAAAATCCCAG 120151 |||| || || |||| |||| ||||| ||||||| || | ||| || |||| ||| Sbjct 66194 CACG-GTTCTCCTCGATGCCGCGGTTATTCTTCAATACCAGCAGACTTTCAACTTCCAGA 66252 Query 120152 TGCCACATCGGGTAGAAA 120169 ||||| || ||||||||| Sbjct 66253 TGCCAAATAGGGTAGAAA 66270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477535022364960