Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq641 89.7 4e-13 >seq641 Length=13309 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| || |||||||| ||||||||||| ||| | ||| | || ||| Sbjct 12762 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCC 12821 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || ||||| || || |||| || |||||||| | |||| || || || || | Sbjct 12822 AATTGTTTACCTGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGA 12881 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| ||| ||| | | | ||||| || || || | || || || || Sbjct 12882 ATCTTTGTTTTAACATTTTCAATATTATCTGAGCTTTCAACTTCAAGAGTGATAGTCTTA 12941 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| ||||| || ||||| Sbjct 12942 CCAGTTAATGTTTTAACAAAGATTTGCAT 12970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380929373176356