Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq319 188 4e-43 >seq319 Length=25483 Score = 188 bits (208), Expect = 4e-43 Identities = 338/484 (70%), Gaps = 16/484 (3%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||||| || | | ||||||| ||||||| || || ||||||||| | ||| Sbjct 7212 TTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATATCACTG 7153 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTT 26007 | ||| | ||||| || | ||||| |||||||| || ||||| || ||| || || || Sbjct 7152 ACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGTTT-TTCTT 7094 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 ||||| | ||| ||||| | ||| | ||||||||| || || || | ||||| ||| Sbjct 7093 GAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAAGGCACC 7034 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 |||||| || || ||||||||||| ||||| | ||||| ||||||||||| | ||| Sbjct 7033 TTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCAT 6974 Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAAT----CTTGGATCCTGTCGAT 26182 ||| || || ||| ||| | | || || || | | |||| ||| || | | Sbjct 6973 TGGTACCAAACCA-TTGCTAGTACCATTGGTACCACGAATATAACTTTGA----GCAGCA 6919 Query 26183 CTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242 | ||| | ||| | |||||| || |||||||| | ||||| || ||| || | | Sbjct 6918 CGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATTGT 6859 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAA 26302 | |||||| | || || | || ||| |||||||| | ||| ||||||||| Sbjct 6858 TTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAACAAGAA 6799 Query 26303 GATAATTGCGAATGA-GTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT--ATAA 26359 || | ||| | ||| | ||| |||| ||| ||||| || ||||| |||||||| |||| Sbjct 6798 GACATTTGTG-GTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAATAA 6740 Query 26360 TATC 26363 | || Sbjct 6739 TTTC 6736 Score = 93.3 bits (102), Expect = 2e-14 Identities = 137/191 (72%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 24983 AGATC-TCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTAT 25041 ||||| |||| | || |||||||| | || | ||||| |||| ||||| | | | Sbjct 8115 AGATCCTCTAGT-AATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACT 8057 Query 25042 TGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGA 25101 | | ||||||||| ||||||||||||||||||| || || | ||||||| || || Sbjct 8056 GTAAATATTTGAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGA 7997 Query 25102 TGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTA---ACAATCTC 25158 || ||||||||| ||| ||||| || || || | |||||| |||| || |||| Sbjct 7996 AGCGGTTGGCATTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTT 7937 Query 25159 TTGTTTTAATT 25169 | ||||||| Sbjct 7936 ATCCTTTAATT 7926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253034535284900