Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq104 217 2e-51 >seq104 Length=42898 Score = 217 bits (240), Expect = 2e-51 Identities = 476/699 (68%), Gaps = 32/699 (5%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||| | |||||| || || | ||| ||||| | || ||||| ||||| |||||| Sbjct 37617 AATGGAGCGAGATGGGTTTTAACGCAAATTGGACCCATACCTGGACCACCACCACCATGT 37676 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||||||||| || ||||| | ||||| |||||| ||||| |||||| ||||| ||| Sbjct 37677 GGAATACAGAAAGTTTTATGAAGATTTAAATGACAAACATCAGCACCAATGTCACCTGGA 37736 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| || || ||||| | |||||||||||| | ||| || |||||||||||| Sbjct 37737 CGACAAAGACCAACTTGAGCATTCATATTTGCACCATCCATATAGACTTGACCACCATTG 37796 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 |||| ||| | ||| || | || |||||||||||||||||| || ||| Sbjct 37797 CTGTGAATGATATCACAAATTTCCTTGGCACCCTCTTCAAATACACCATGAGTGGAAGGA 37856 Query 138402 TATGTAATCATAATACATGAG-AGTTCAAATGTA--TTCATGATT----GCTTTCTTCTC 138454 || || ||||||| ||| || | |||||| || ||| || ||||| | Sbjct 37857 TAAGTGATCATAA-----GAGCAG--CCAATGTATCTTTATGTTTTTCAGCTTTAGCTTT 37909 Query 138455 TAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCC 138514 ||||| | || || || |||| ||||||| | ||| | ||||| ||||| || Sbjct 37910 AAGATCGGCAACATCAATATTACCATTGGCATCACAATCGACCACAACAACCTTCATACC 37969 Query 138515 TGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATT 138574 |||| | ||||| || |||||||| ||||| || || |||| || ||||| || || Sbjct 37970 AACCATTGCAGCACTTGCTGGATTAGTACCATGAGCAGAAACTGGAATGAGACAAACGTT 38029 Query 138575 TCTTTTATCATCTCCTGATC-CTTGATG----ATATGCTTGGATTGCTAACAGTCCTGCA 138629 ||||| | || ||| | |||| | ||| | | ||| | | | || || Sbjct 38030 TCTTTGA----CT-TTGACCAATTGAAGTTAAATAGGAACGAATTACCATTAAACCAGCG 38084 Query 138630 TACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || ||||| || || || || || |||||||| || | ||| ||||| || | ||| Sbjct 38085 TATTCACCTTGAGAGCCAGCATTTGGTTGTAAAGAACAACCATCGAAACCAGTTACCTCA 38144 Query 138690 CATAACCATTTCTGTAA-GTCATCTATTATCTTTTGATAACCCATGGTCTGTATCATAGG 138748 ||||| ||| | || || | || | || | | |||||||| | || || | | Sbjct 38145 CATAA-CATATTTGAAATGGATTCAAACATTTCCTTATAACCCAATGATTG-AT--TGGC 38200 Query 138749 T-GTATG--TGGATGCACGTTGGCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGC 138805 | ||| | |||||| | | ||| ||| |||||| || || || ||| | | Sbjct 38201 TGGTACGAATGGATGAATAGAGTTAAACTCTGGCCATGAAACTGGATACATTTCAGTGGT 38260 Query 138806 TGCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCAT 138844 ||||||| ||||||||||||||| || | ||||| ||| Sbjct 38261 GGCATTTAATTTCATTGTGCAACTGCCCAATGGAATCAT 38299 Score = 181 bits (200), Expect = 1e-40 Identities = 216/290 (74%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 139858 GCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATC 139917 ||||||| || || || || ||||||||||| |||| ||||| ||||| |||||||| | Sbjct 39352 GCATTGCTTCAGCGGCAGCGGTTGCTTCATCCAATAATGATGCATTTGCCATTGGTAAAC 39411 Query 139918 CTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATA 139977 |||||| |||| || | ||||||||||| |||||| ||||| | || ||| | Sbjct 39412 CTGTAAACTCTGATATCATGGTTTGGTAATTCAATAAACTCTCCAAACGACCTTGACTGA 39471 Query 139978 TCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCT 140037 | ||||||||||| |||||||| | ||| ||||||| |||||||| | || ||| || | Sbjct 39472 TTTCAGCTTGATATGGAGTGTATGGTGTATACCAACCTGGATTCTCTAAAATGTTACGTT 39531 Query 140038 GTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT--AAGA-CTAGGTTTTA 140094 | || || | ||||||||||| ||||| || || ||| || | || ||| | | Sbjct 39532 GAATTACATGTGGTGTAATGGTACCATAATAACCCATACCAATGAATGATCTA---TAAA 39588 Query 140095 CTTTGTTTGCTTTTGCTATATTTTTTAACTCTGCCAATGCTTGATGCTCA 140144 |||| ||| || |||||| ||||| || ||| |||| ||||| |||| Sbjct 39589 CTTTATTTTTTTCTGCTATCTTTTTCAAATCTTTCAATAATTGATTCTCA 39638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578985575185440