Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq274 230 3e-55 >seq274 Length=24667 Score = 230 bits (254), Expect = 3e-55 Identities = 399/574 (70%), Gaps = 16/574 (3%) Strand=Plus/Minus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTT---CCTGTGGCAATAACAAAATCA 47808 |||| |||||||| | ||| || |||| || || || ||||| ||||| ||||| Sbjct 673 GATTTTTCAACAAATTCACGAACTGAAT---GAGTTTCACCAGTGGCGATAACGAAATCT 617 Query 47809 TCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCC 47868 || |||| |||||||| | |||||||||||| || ||||| || |||||||| || ||| Sbjct 616 TCTGGTTTCTCTTGTTGTAACATTAACCACATTGCTTCGACGTAGTCTCTGGCGTGACCC 557 Query 47869 CAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATT 47928 || ||||| || | || ||| || | || | || | ||||| || | | Sbjct 556 CAATCACGTTTAGCGTTAATATTACCCAAGTAGAGGATTTCATCTTTACCA-CATGCAAT 498 Query 47929 GCTTTTAATGCT-CTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTC 47987 | || | | || ||||| | ||||||||| ||| ||| | | ||| ||||| Sbjct 497 ACCAGCAACGAAACGAGTGATCTTTCTAGTTACAAAGGTTGGACCTCTACGTGGTGATTC 438 Query 47988 ATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTAC 48047 ||| || || | |||||| |||| || ||||| |||||| ||||||||||| || Sbjct 437 ATGGTTGAATAAGATACCATTACATGCGTACATATCGTATGCCTCACGATAGTTTACAAC 378 Query 48048 TATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGT 48107 ||||| || |||| ||||||| ||| | || || |||||||||||||| |||||||| Sbjct 377 GATCCAATAGGCATATTGTTTTGCTACAGCGTATGGTGAACGTGGATAGAATGGTGTGGT 318 Query 48108 CTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGAT 48167 ||||| |||||| ||||||| ||||||||||| | |||| ||| || ||||| ||| Sbjct 317 CTCTGATTGTGGAATCTCTTGAACCTTACCATATAATTCAGAGGTTGAAGCTTGGTAGTA 258 Query 48168 ACGAACCCTATCTTCCATCTCAAGCA----AACGGACTGCCTCAAGCACTCTCAGGGTGC 48223 | |||| ||||| ||| || || ||| | ||| || | | | || | Sbjct 257 TCTAACC--TTCTTC--TCTAAACCACAACTACGAATTGCATCCAATAAACGGAGACAAC 202 Query 48224 CTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCT 48283 ||| |||| | ||| ||||| || | ||| ||||| || || || || ||||| | Sbjct 201 CTAAACCATCAACATCACCTGTATATTCTGACATATCAAATGATACTTTAACGTGACTTT 142 Query 48284 GTGCCCCAAGATTATAAATCTCATCTGGTTGAAC 48317 | || || | ||| ||||| ||| ||| | ||| Sbjct 141 GAGCACCTAAATTGTAAATTTCAGTTGGATTAAC 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665479659299040