Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 >seq1 Length=107950 Score = 181 bits (200), Expect = 2e-40 Identities = 301/429 (70%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 87554 CTTCGCCACCGGCGAAGCGGGGTGTGGGAAAACGTTTATTTCCGCCGCATACGCTTGCGA 87613 ||||||||| |||||||| || || || ||||| || | | | || ||| | Sbjct 96056 CTTCGCCACTGGCGAAGCCGGCTGCGGTAAAACCTTCCTGGCGACTGCCGTCGCGGCACA 95997 Query 87614 ACGTTTGCTGGCCAAAGATATCGAACGTATCATCGTCACTCGTCCGGTGCTCTCCGCAGA 87673 || || || | || || | || || || ||||| || || || || || ||||| Sbjct 95996 GCGATTACTCGATAAGGAAGTAGAGCGAATTATCGTTACGCGCCCTGTACTGCAGGCAGA 95937 Query 87674 TGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCGTACTTCCGCCC 87733 || ||||| ||||||||||| ||||| | ||||| || ||||| |||| ||| || || Sbjct 95936 GGAGGATTTGGGCTTCCTGCCTGGCGATATGGCCGAGAAGTTCGCTCCGTTCTTTCGTCC 95877 Query 87734 TGTTTATGACGTTCTTCAAAAACGTCTCGGTAGCCGCTAC----CTGCAATACTGCCTTA 87789 || || || || || || || || || || |||| | || |||||||||| | Sbjct 95876 CGTCTACGATGTGCTGCAGAAGCGCCTGGG----CGCTTCATTTCTCGAATACTGCCTAA 95821 Query 87790 AGCCCGGTATCGACAAAGTGGAGATTGCTCCTTTTGCGTACATGCGTGGCCGCAGTTTCG 87849 |||| | | | ||||| ||||| || || || || |||||||| || |||| |||| Sbjct 95820 AGCCTGAGGTGGCTAAAGTCGAGATCGCCCCCTTCGCATACATGCGCGGTCGCACGTTCG 95761 Query 87850 AAAATGCGGTTGTCATTTTAGATGAAGCTCAGAACACTACTGC-TCAGCAGATGAAGCTC 87908 |||| || || || || | ||||| || |||||| || || ||| || |||||| | Sbjct 95760 AAAACGCTGTGGTGATCCTCGATGAGGCCCAGAACGTGACGGCGTCA-CAAATGAAGATG 95702 Query 87909 TTCCTGACACGTATCGGGGAGAACTGTATC-GTTATCGTAAACGGTGACGTCACACAGTG 87967 |||||||| || || || |||||| ||| | || ||||| || ||||| || || || || Sbjct 95701 TTCCTGACTCGGATGGGTGAGAAC-GTAACGGTCATCGTGAATGGTGATGTGACGCAATG 95643 Query 87968 CGACTTGCC 87976 |||| |||| Sbjct 95642 CGACCTGCC 95634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716620926494880