Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 >seq1 Length=107950 Score = 131 bits (144), Expect = 2e-25 Identities = 163/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 145932 ACATCAGGTCGTTGATTTGAACACCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGC 145991 |||||||| |||||| || || || |||| ||||||| ||||| || || | || Sbjct 66152 ACATCAGGCGGTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGC 66211 Query 145992 CTTTGTTGTTCTTGAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 146051 | ||| ||||| | ||| || || |||||||||||| ||||| || || ||| | Sbjct 66212 CGCGGTTATTCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAG 66271 Query 146052 ATGTCGCCGCGCCACCGCGAACTCCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGT 146111 ||||| |||||||| ||||| ||||| || ||||| || || || || || |||| || Sbjct 66272 CCGTCGCTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGT 66331 Query 146112 GTTTCCAGAAA-GGAATAACTCCAGTATGCTTGACTTCTCC 146151 |||| |||||| || || || ||||| || || ||||||| Sbjct 66332 GTTT-CAGAAAGGGGATTACGCCAGTGTGGGTGGCTTCTCC 66371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554342921032320