Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq1 257 2e-63 >seq1 Length=107950 Score = 257 bits (284), Expect = 2e-63 Identities = 380/533 (71%), Gaps = 4/533 (1%) Strand=Plus/Plus Query 87334 CAGAGCTCAGAGCGCACGCAGTCATCCTTCGTGAACTCTACAACCCCAATGCGG-GACGT 87392 || ||||||||||||||||| || || ||||||||| | | ||| | || || | Sbjct 95526 CACAGCTCAGAGCGCACGCAATCTTCGGCCGTGAACTCAATGAGCCCTACCTGGCGAGAT 95585 Query 87393 GGTACTGAAACGCTGTAGCGCGTCGGAAAGTCCACTTTGGACCCCTCTCGGTAAATCACA 87452 || | ||| ||||| || ||||| ||| ||| || || | ||| | || || Sbjct 95586 GGC-CGGAACCGCTGCAGGGCGTCCTCAAGACCAGATTTAACATTACCCGGCAGGTCGCA 95644 Query 87453 CTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGGAACAT 87512 || | ||| || || || || || || || ||||||||||||| || ||||||||||| Sbjct 95645 TTGCGTCACATCACCATTCACGATGACCGTTACGTTCTCACCCATCCGAGTCAGGAACAT 95704 Query 87513 TTTCATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGTTCTCAAA 87572 ||||| |||| | || ||||||||||| || || ||||| || || ||||| || || Sbjct 95705 CTTCATTTGTGACGCCGTCACGTTCTGGGCCTCATCGAGGATCACCACAGCGTTTTCGAA 95764 Query 87573 CGTGCGGCCACGCATATACGCGAAGGGAGCAATTTCCACCTTCTTCACATCCGGGCGCAA 87632 |||||| || ||||| || |||||||| || || || || || ||| || || | Sbjct 95765 CGTGCGACCGCGCATGTATGCGAAGGGGGCGATCTCGACTTTAGCCACCTCAGGCTTTAG 95824 Query 87633 GCAGTACTGAAGGAACGTACCACCAAGGCGTTTCTCCAGGATGTCTTGAACCGGGCGGAA 87692 |||||| | || || | | | || ||||| |||| ||| | || | || || || || Sbjct 95825 GCAGTATTCGAGAAATGAAGCGCCCAGGCGCTTCTGCAGCACATCGTAGACGGGACGAAA 95884 Query 87693 ATACGGGGCGAATTTCTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTCTCACCGGACTC 87752 |||| ||||| |||||| || || ||||||| |||||||| | ||| | | || Sbjct 95885 GAACGGAGCGAACTTCTCGGCCATATCGCCAGGCAGGAAGCCCAAATCCTCCTCTGCCTG 95944 Query 87753 TAAGACAGGACGCGTCACGATGATGCGCTCCACCTCTTTATCCAGCAAT-GCTTTGGCCG 87811 | ||||| ||||| ||||| || ||||| || || ||||| || ||| ||| | |||| Sbjct 95945 CAGTACAGGGCGCGTAACGATAATTCGCTCTACTTCCTTATCGAGTAATCGCTGT-GCCG 96003 Query 87812 CGTGCGCAGTTGACAGGAATGTTTTACCACAACCGGCTTCACCCGTTGCAAAG 87864 || ||||| | |||||| |||||||| || |||||||| || || || ||| Sbjct 96004 CGACGGCAGTCGCCAGGAAGGTTTTACCGCAGCCGGCTTCGCCAGTGGCGAAG 96056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698541326966880