Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_024125.2 Length=168470 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=107950 Score = 158 bits (174), Expect = 1e-33 Identities = 272/393 (69%), Gaps = 4/393 (1%) Strand=Plus/Plus Query 140771 ACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACG 140830 || ||||| |||| |||||||| ||||| || || | ||| |||||| ||||| || Sbjct 66172 ACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCAATACC 66231 Query 140831 AGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGA 140890 || ||| |||||||||||| |||||||||||| || |||| || || ||||| || ||| Sbjct 66232 AGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGA 66291 Query 140891 ATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACA 140950 | |||||||| || |||||||| ||||| ||||| || |||||| ||| || || || Sbjct 66292 ACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCAGAAAGGGGATTACG 66351 Query 140951 CCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAATCATACCAACG 141010 ||||| ||| |||| || ||| |||| | || ||||| | |||| Sbjct 66352 CCAGTGTGGGTGGCTTCTCCATTGCGGATCTCACTCCCCAATGCACGCAGTCGGCCAAAA 66411 Query 141011 TTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTATTG 141070 ||| ||||| ||||| || || | || || | ||| | || ||| || || Sbjct 66412 CCAATCCCAATGCCAGCACGACGCGACACGTAATCGATAATGGCAGAGGACGCAGCGCTG 66471 Query 141071 ATAGACTTCAATGAATCTCCTGCCTCAATAACAACACA--TGAACTAAACTGTCGAGTCG 141128 || ||||| ||| | | |||||| | ||| || || | ||||| || |||| Sbjct 66472 ATCCCTTTCAAACTGTCTTCGGACTCAATCAGAACGCAGCTGGA--GAACTGGCGCGTCG 66529 Query 141129 GAGTACGGCAACCAGCCATAATAGGAGTTGGCA 141161 | |||||| || ||||| || || || |||| Sbjct 66530 GGGTACGGACGCCGGCCATGATTGGGGTGGGCA 66562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538964061681600