Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=107950 Score = 154 bits (170), Expect = 2e-32 Identities = 351/526 (67%), Gaps = 14/526 (3%) Strand=Plus/Minus Query 41172 TGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTT 41231 |||| | || || || || ||||| || || ||||| || ||||| ||||| ||||| | Sbjct 66568 TGTCTCTGCCCACCCCAATCATGGCCGGCGTCCGTACCCCGACGCGCCAGTTCTCCAGCT 66509 Query 41232 GCGTAGTGATTGAATCAGGTGA----TTCCCTGGGTTCTCTGAATGCTGTAACCTCTGCG 41287 |||| ||||||| || | || || ||| || | |||| ||||||| Sbjct 66508 GCGTTCTGATTGAGTCCGAAGACAGTTTGAAAGGGATC----AGCGCTGCGTCCTCTGCC 66453 Query 41288 ATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTTAATGCTGGACACATTCGCGCA 41347 || | | || | || | |||||||| || || || | ||| | | || ||| Sbjct 66452 ATTATCGATTACGTGTCGCGTCGTGCTGGCATTGGGATTGGTTTTGGCCGACTGCGTGCA 66393 Query 41348 ATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAA 41407 |||| | | ||||| ||| ||||| || || ||||| ||||| || |||| Sbjct 66392 TTGGGGAGTGAGATCCGCAATGGAGAAGCCACCCACACTGGCGTAATCCCCTTTCTGAAA 66333 Query 41408 CATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACG 41467 || | ||||| || || ||||| || || || ||||||||||| ||||| || || ||| Sbjct 66332 CACTTCCAGACCGCTGTGAAATCATGCTCGCAGGGTGGCGTTCGAGGTGGCGCAGCGACG 66273 Query 41468 TTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAA 41527 | || || || |||||| |||||||||||| |||||||| |||| || ||| Sbjct 66272 GCTTTCTACCCTATTTGGCATCTGGAAGTTGAAAGTCTGCTGGTATTGAAGAATAACCGC 66213 Query 41528 GGTGTTGAGAATAACCGCATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATG 41587 || | ||| | ||||| ||||||| ||||| |||||||| | | ||| ||||| Sbjct 66212 GGCATCGAGGAGAACCGTGTTCGTCATCTGGACTATGGCGTAATGATCAACCGCCTGATG 66153 Query 41588 TATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCCCTGACGTTGCAAATGAT 41647 ||| || | | ||||| | || || ||||||||||| | | || | | Sbjct 66152 TATCGCCGCCTGGTACGCAACGAGAATATTACGCTGTTCAGCCCGCATGATGTACCGG-- 66095 Query 41648 CGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAAG 41693 | || ||||||||||||| | | ||||||| | ||||||| Sbjct 66094 -GGCTCTATGATGCTTTCTTT---GTTGATCAGGACAAATTCGAAG 66053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570006574074720