Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq90 95.1 1e-14 seq1199 87.8 2e-12 >seq90 Length=44396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| || || | | |||| || ||||| ||||| || ||| | ||||| |||| Sbjct 14417 AAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGTACGACCATCT 14358 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||||| | |||| ||||| ||||||||||| || || |||||||| || Sbjct 14357 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 14298 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||| || ||| | | ||| | | || | || ||||||| || | ||| Sbjct 14297 TGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGATGGTT 14238 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | ||||| | ||| || ||||| Sbjct 14237 TTACCAGTTAAGGTTTTAACGAAGATTTGCAT 14206 >seq1199 Length=11192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | | || |||||||| || ||||| || | ||||| |||| Sbjct 738 AAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAAAGTACGACCATCT 797 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||| | | | |||| | ||||||||||| || || ||||||||||| Sbjct 798 TCTAATTGTTTACCTGCAAAAATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 857 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||||| ||| | | ||| | |||| | || ||||| | || | ||| Sbjct 858 TGGATTTTGGCTTTGACATTTTCAATGTTATCTGAACCTTCGACTTCTAATGTGATGGTT 917 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||||| |||||||||| || || |||||| Sbjct 918 TTACCAGTGAGAGTTTTTACAAAGATTTGCATG 950 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| |||||||| || | ||||| |||||| | |||||||| | Sbjct 984 GATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCG 1043 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| ||||| ||||| || || ||||||||||| |||||| ||| | Sbjct 1044 AAAATGAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACA 1103 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||| | || ||||| | || | ||||||||||| |||||||| Sbjct 1104 TTTTCAATGTTATCTGAACCTTCGACTTCTAATGTGATGGTTTTACCAGTGAGAGTTTTA 1163 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 1164 ACAAAGATTTGCAT 1177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476600643061920