Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq274 165 1e-35 >seq274 Length=24667 Score = 165 bits (182), Expect = 1e-35 Identities = 359/535 (67%), Gaps = 2/535 (0%) Strand=Plus/Plus Query 161173 TGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATA 161232 ||| || ||||| |||| || || ||||| || |||||||| || || | ||||| Sbjct 119 TGAAATTTACAATTTAGGTGCTCAAAGTCACGTTAAAGTATCATTTGATATGTCAGAATA 178 Query 161233 TACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGG 161292 ||||| | ||||| | | || || | ||||||| ||| ||||| || Sbjct 179 TACAGGTGATGTTGATGGTTTAGGTTGTCTCCGTTTATTGGATGCAATTCGTAGTTGTGG 238 Query 161293 TATGACAGAT-AGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTAC 161351 | | | ||| | ||| | |||||| || || ||| ||| || ||||| ||| | Sbjct 239 TTT-AGAGAAGAAGGTTAGATACTACCAAGCTTCAACCTCTGAATTATATGGTAAGGTTC 297 Query 161352 AAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTA 161411 |||||| ||||| ||| || ||||| ||||| ||||| || ||||| | ||||| | Sbjct 298 AAGAGATTCCACAATCAGAGACCACACCATTCTATCCACGTTCACCATACGCTGTAGCAA 357 Query 161412 AACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTA 161471 ||| |||| |||||||| || ||||| | ||| || | ||| |||| ||| Sbjct 358 AACAATATGCCTATTGGATCGTTGTAAACTATCGTGAGGCATACGATATGTACGCATGTA 417 Query 161472 GTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGA 161531 |||||| ||||||||||||| |||||||| | ||| || || ||||| | |||| Sbjct 418 ATGGTATCTTATTCAACCATGAATCACCACGTAGAGGTCCAACCTTTGTAACTAGAAAGA 477 Query 161532 TTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATC 161591 | ||| | | | ||||| || | | || || ||| | |||||| Sbjct 478 TCACTCGTTTCGTTGCTGGTATTGCATGTGGTAAAGATGAAATCCTCTACTTGGGTAATA 537 Query 161592 TAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGT 161651 | ||| | | ||| ||||||||||| || |||||| || || || |||||||| |||| Sbjct 538 TTAACGCTAAACGTGATTGGGGTCACGCCAGAGACTACGTCGAAGCAATGTGGTTAATGT 597 Query 161652 TACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGT 161706 ||||||| || | || || || | || || ||||| ||| || ||||||| Sbjct 598 TACAACAAGAGAAACCAGAAGATTTCGTTATCGCCACTGGTGAAACTCATTCAGT 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729913432059360