Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq319 291 1e-73 >seq319 Length=25483 Score = 291 bits (322), Expect = 1e-73 Identities = 1152/1785 (65%), Gaps = 68/1785 (4%) Strand=Plus/Minus Query 68404 GTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTT 68463 ||||| |||||||||||||| || || | |||| |||||| ||||||||||||| Sbjct 8403 GTACGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAG 8344 Query 68464 GTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATG 68523 || ||||||| | | |||| || || || || ||| | ||| |||||||||||| Sbjct 8343 GTGAGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATG 8284 Query 68524 AAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTC 68583 ||||| || | ||| || ||||| | || | | | ||||| |||||||||||| ||| Sbjct 8283 AAAGCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGAATTTCCCAAACAGTT 8224 Query 68584 TTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTATT---TTGAATGGATCCACCATCG 68640 ||| | | | ||| | ||||| || | || | | ||||||||| |||| | Sbjct 8223 TTATAGAGTTCTTTCAATTCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGCT 8164 Query 68641 GATATAATTATATTCTTGATCTCATCATTCCACAATTTTCT-CTCCGTTAAAAC-TCTAA 68698 | || ||| ||||| ||||| |||| ||| | |||| | | | | |||| Sbjct 8163 GCAATGATTTGGTTCTTCATCTCTGGTGTCCA-AATACCCAACTCCATGAGATCCTCTA- 8106 Query 68699 GGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTAC 68758 | | || ||| || ||| ||||| |||| ||| || | |||| |||||||||| Sbjct 8105 GTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTTG 8046 Query 68759 TGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCA 68818 || |||||||| | | ||||||| || || || |||||| ||||| || ||||||| Sbjct 8045 AAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCA 7986 Query 68819 TAGGTGCCACCAATAAACTATTTCTAAGACCA--TGTGTT-ATGATTTTATCTTTTAGAT 68875 | ||||| | || | || | | |||| | | || | ||| ||||| |||| | Sbjct 7985 TTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAATT 7926 Query 68876 GTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGT 68935 | |||||| |||| | | |||| ||||||||| | ||| ||||| || || || | Sbjct 7925 CTGTCCAATTCCAACGTGAACTTGGTGTAACATTCCACATATCATATTGAAGGATACCTT 7866 Query 68936 TACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAAC 68995 || || ||| || | | | ||||||||| || || | | || | |||| | Sbjct 7865 TAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTCATGAG 7806 Query 68996 TTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCT 69054 || ||| ||| || ||||||| ||||| || | ||| | || | | || Sbjct 7805 AGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTA-ATTTGGCAGCG 7747 Query 69055 TCTAGACTATCGAATGG-ATA---ATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 | | ||||||||| || ||| || | || ||| | ||||||| || || |||| Sbjct 7746 GCAACACTATCGAAAGGCATACGCATTTTAATGAAAA----CATCTGCTAAACCTTGAAT 7691 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 |||||||| || || | |||||| |||||| ||| ||| || || |||||||| Sbjct 7690 ACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGCCTCGATAACTGGATAATA 7631 Query 69171 ATTAATATCTATAATTTTATTAAGATTTCGGACT---ACTACTTTAACCACGTCCTTTAG 69227 ||| ||| || || |||||||||| ||| | || ||| | || || Sbjct 7630 GTTACGATCAATGATAACATTAAGATTT---ACTGTGATTAATTTGGTGATTTCAAAGAG 7574 Query 69228 T--TTGAG----AAAATCAAA-----------TCGTCCATC------TATAACAAACATA 69264 |||| ||| ||||| | || | | | | || || | Sbjct 7573 GAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAATGAA 7514 Query 69265 TTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTG 69320 || ||||| | ||| || ||||||||||| || | |||| | || |||||| Sbjct 7513 TTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGTATATTG 7454 Query 69321 TATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTT 69380 || || |||||||| |||||||||| | || || || | ||| | ||||| || Sbjct 7453 AATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTT 7394 Query 69381 TTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGAT 69440 || || || ||||| || | || || || ||||||||||||| |||||||| || Sbjct 7393 GGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATTCCAT 7334 Query 69441 AATAGATTTCCAAACGACCCT-AGCATTTATTACG-GTCTTGTAACGCTTCTCTTT--TT 69496 ||| | ||||| || | | ||| || |||| |||||| | || | | || Sbjct 7333 AATGGCGAACCAAA-GATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTGGCTT 7275 Query 69497 CATATTGT--GTATATAGCCGTTCGAA-TTCATCTCCCCAAACATCATCCAATCCAGGAC 69553 |||||| ||| | ||| ||| || || | ||| | | || || Sbjct 7274 CATATTTCAAGTAGAGAGCA---CGATGTTGTTCAGAGTGAGTTTCAGCAAGACCTGGTG 7218 Query 69554 ATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGAT 69613 ||| |||||||| | | | ||| || ||| | | || || | |||||| | || Sbjct 7217 CTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATAT 7158 Query 69614 CGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttt 69672 | | |||||| || ||| || || ||||| | ||| | || || || || || ||| Sbjct 7157 CACTGACCCAAAGGGC-ATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGTTT 7099 Query 69673 tttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATG 69732 || || ||||| | || || | | ||| | |||||||| || | || | || | | Sbjct 7098 TTCTTGAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAAG 7039 Query 69733 ACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTC 69792 | || || || || || ||||| | ||| | ||||| | ||| | || | Sbjct 7038 GCACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGA 6979 Query 69793 AGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCG 69852 ||||| || | | |||||| ||||||| || ||| |||||||||| || Sbjct 6978 AGCATTGGTACCAAACCATTGCTAGTACCATTGGTACCACGAATATAACTTTGAGCAGCA 6919 Query 69853 CGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT 69912 ||||| ||| || | | ||| || || || || | || ||||| || || || || Sbjct 6918 CGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATTGT 6859 Query 69913 TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 ||||| || || || ||||| || || ||| ||| |||| | || | ||||| | Sbjct 6858 TTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAACAAGAA 6799 Query 69973 GACATTTGATGATG-TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 |||||||| || || | || || ||||| ||||| || || | || |||||||| | Sbjct 6798 GACATTTG-TGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAATAA 6740 Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCC 70091 ||| || || | | |||||||| | ||||| || || || || ||| || || Sbjct 6739 TTTCTCTGATAAACGTTTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGATACC 6680 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTT 70136 || | |||||||||||||| || || || ||||| || |||| Sbjct 6679 AATTGAAACACGCATCAACATGTGTTGTGGACGTTCGACGATTTT 6635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686893584970080