Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=107950 Score = 116 bits (128), Expect = 4e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 14856 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAA 14915 || || || |||||||||| ||||| || || | || ||| ||||| ||||||| Sbjct 66175 CCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCAATACCAGC 66234 Query 14916 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGGACA 14975 || ||||||| || |||||||| || || || || || ||||| ||||| || || Sbjct 66235 AGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGAACG 66294 Query 14976 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGA-ATTACGCC 15034 || || || || || ||||| || || ||||| || |||||| ||||||| |||||||| Sbjct 66295 CCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTC-AGAAAGGGGATTACGCC 66353 Query 15035 AGTATGTTTTACTTCGCCATT 15055 ||| || | |||| ||||| Sbjct 66354 AGTGTGGGTGGCTTCTCCATT 66374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505777596778080