Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_027353.1 Length=167063 Score E Sequences producing significant alignments: (Bits) Value seq1 163 3e-35 >seq1 Length=107950 Score = 163 bits (180), Expect = 3e-35 Identities = 193/259 (75%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 140587 TCATGCGGACTGAACAAAGTAATATAATCGTTCTTTCCGAATCGTTCCAT-CATCAAATC 140645 |||||||| ||||||| ||||||| ||||| | | | || | || ||||| Sbjct 66103 TCATGCGGGCTGAACAGCGTAATATTCTCGTTGCGTACCAGGCGG-CGATACATCAGGCG 66161 Query 140646 ATTCAGCTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 140705 || | | || ||||| |||| |||||||| ||||| || || | ||| |||||| Sbjct 66162 GTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATT 66221 Query 140706 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 140765 ||||| || || ||| |||||||||||| |||||||||||| || |||| || || || Sbjct 66222 CTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGC 66281 Query 140766 GCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAA 140825 ||| || |||| |||||||| ||||||||||| ||||| ||||| || |||||| ||| Sbjct 66282 GCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCAGAAA 66341 Query 140826 AGGAATAACACCAGTATGG 140844 || || || ||||| ||| Sbjct 66342 GGGGATTACGCCAGTGTGG 66360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534461761409760