Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq319 150 2e-31 >seq319 Length=25483 Score = 150 bits (166), Expect = 2e-31 Identities = 400/597 (67%), Gaps = 17/597 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 ||||| |||||||| || ||||| | || | | |||| | || | |||||| |||| Sbjct 8400 CGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTG 8341 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | |||||| | | ||||| | || | ||||||| |||||||||||| Sbjct 8340 AGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATGAAA 8281 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTCCT 118015 || ||||| || ||||||||||| | | | ||| | |||||||| ||||| | Sbjct 8280 GCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGAC-GAATTTCCCAAACAGTTTT 8222 Query 118016 GTAGAGGTTCTT--AATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||| |||||| ||| ||||| ||||| | | || ||| ||||| |||| || Sbjct 8221 ATAGA-GTTCTTTCAAT-TCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGC- 8165 Query 118074 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130 || | |||| | | |||||| || || ||| | ||| | || |||||||||| Sbjct 8164 -TG-CAATGATTTGGTTCTTCATCTCTGGTGTCCAAATACCCAACTCCATGAGATCCTCT 8107 Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190 | | || |||||||||| || ||||| || | || | || ||||| Sbjct 8106 AGTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTT 8047 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250 | |||||||| ||||| || ||||||||||| | |||||| ||| || || || ||| Sbjct 8046 GAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGC 7987 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGAC--CCTTT-TCCCTAATGCGTTCCTTGAGA 118307 || ||||| || | || |||||| | || ||||| | || ||||| | Sbjct 7986 ATTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAAT 7927 Query 118308 GC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 | |||| | || | ||| ||| || | | | |||||||||| | || |||||||| Sbjct 7926 TCTGTCCAATTCCAACGTGAACTTGGTGT-AACATTCCACATATCATATTGAAGGATACC 7868 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 || || ||||| || || | || | ||||| || || ||| | |||||||| Sbjct 7867 TTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTC 7811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421501660320