Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq41 123 1e-23 >seq41 Length=55081 Score = 123 bits (136), Expect = 1e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171 |||| | ||| ||||| |||||||||| ||| | || ||||| || | || | | || Sbjct 23301 TTAAAAGATTGATATTATTTGAACCAACAAACTCTTGGGCCATACCAACGATGGTAGAAT 23360 Query 65172 TTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAG 65231 |||||| || ||||| ||||||||| | ||||||||||| ||||| ||| | ||||| | Sbjct 23361 ATAAACTTGCCTCACCATGATGATATGCAGAATGTTCAGAAACATAACCAATCAATTGTG 23420 Query 65232 CAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAAC 65291 | ||||| ||||| | ||| ||| | || || |||||| | |||| | | Sbjct 23421 CTACTTTGATTTCTTTCTTTAGATTTCTCTTGAAACAAGAATAGAGAGTTTTTCTGAGTG 23480 Query 65292 TAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATC 65337 | ||||||| ||||| | | ||| |||||| ||| |||||||| Sbjct 23481 AAGTTTTCAAACCATCTACAATATTTGGAATGGATCTTTCACAATC 23526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235674910195800