Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 >seq1 Length=107950 Score = 120 bits (132), Expect = 3e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 128633 CATCAGGTTATTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACC 128692 ||||||| || ||| || ||||| || | |||||||| |||||| || || | || Sbjct 66153 CATCAGGCGGTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCC 66212 Query 128693 TTTGTTGTTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAG 128752 ||| ||||| | ||| || || |||||||||||| ||||| || || ||| | Sbjct 66213 GCGGTTATTCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGC 66272 Query 128753 TGTCGCCGCGCCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTG 128812 ||||| |||||||| || || || || || ||||| ||||| || || || |||||||| Sbjct 66273 CGTCGCTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTG 66332 Query 128813 CTTCCAGAAA-GGAATAACTCCAGTATGTTTGACTTCACC 128851 || |||||| || || || ||||| || || |||| || Sbjct 66333 -TTTCAGAAAGGGGATTACGCCAGTGTGGGTGGCTTCTCC 66371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532061814569760