Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq1 152 5e-32 >seq1 Length=107950 Score = 152 bits (168), Expect = 5e-32 Identities = 194/265 (73%), Gaps = 14/265 (5%) Strand=Plus/Minus Query 23003 CCATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGACTGCTGTTAAATCATGTTCACA 23062 ||| ||||| || || || ||| |||||| || ||||| ||||| |||||||| || || Sbjct 66360 CCACACTGGCGTAATCCCCTTTCTGAAACACTTCCAGACCGCTGTGAAATCATGCTCGCA 66301 Query 23063 GGGCGGAATTCGTGGTGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGA 23122 ||| || |||| |||||||| || || |||| || |||||||||||| |||||||||| Sbjct 66300 GGGTGGCGTTCGAGGTGGCGCAGCGACGGCTTTCTACCCTATTTGGCATCTGGAAGTTGA 66241 Query 23123 AAATCTTCTCGTTTTGAAAAATAACAAAGGTGTAGAAGAAAACCGCATTCGTCATATGGA 23182 || ||| || || ||||| |||||| || | || || ||||| |||||||| |||| Sbjct 66240 AAGTCTGCTGGTATTGAAGAATAACCGCGGCATCGAGGAGAACCGTGTTCGTCATCTGGA 66181 Query 23183 TTATGGTGTTCAACTGAATGATCTA----ATGATGGAACG--TTTTGGAAAG-AACGACT 23235 ||||| || ||||||| | ||||| | || ||| | | ||||| Sbjct 66180 CTATGGCGT-------AATGATCAACCGCCTGATGTATCGCCGCCTGGTACGCAACGAGA 66128 Query 23236 ACATTACTTTGTTCAGTCCGCATGA 23260 | ||||| ||||||| |||||||| Sbjct 66127 ATATTACGCTGTTCAGCCCGCATGA 66103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534656957086080