Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_028927.1 Length=167298 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-32 >seq1 Length=107950 Score = 152 bits (168), Expect = 6e-32 Identities = 194/265 (73%), Gaps = 14/265 (5%) Strand=Plus/Plus Query 43502 TCATGCGGACTGAACAAAGTAATGTAGTCGTT-CTTTCCAAAA--CGTTCCATCAT---- 43554 |||||||| ||||||| ||||| | ||||| | | ||| || | ||||| Sbjct 66103 TCATGCGGGCTGAACAGCGTAATATTCTCGTTGCGTACCAGGCGGCGATACATCAGGCGG 66162 Query 43555 TAGATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTT 43614 | ||||||| || ||||| |||| |||||||| ||||| || || | || Sbjct 66163 TTGATCATT-------ACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCG 66215 Query 43615 GTTATTTTTCAAAACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGT 43674 |||||| ||||| || || ||| |||||||||||| |||||||||||| || |||| || Sbjct 66216 GTTATTCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGT 66275 Query 43675 AGCAGCGCCGCCACGAATTCCACCTTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTT 43734 || ||||| || |||| ||||| || ||||||||||| ||||| ||||| || ||||| Sbjct 66276 CGCTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTT 66335 Query 43735 CCAAAAAGGAATAACACCAGTATGG 43759 | ||| || || || ||||| ||| Sbjct 66336 CAGAAAGGGGATTACGCCAGTGTGG 66360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535213744752960