Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=107950 Score = 154 bits (170), Expect = 2e-32 Identities = 351/526 (67%), Gaps = 14/526 (3%) Strand=Plus/Plus Query 77068 CTTCGAACTCAGTCTGATCAGCTTGATAGAAAGCATCATACAGGCGATCATTTGCAACGT 77127 ||||||| | ||||||| | | ||||||||||||| || | | | || | | Sbjct 66053 CTTCGAATTTGTCCTGATCAAC---AAAGAAAGCATCATAGAGCC---CCGGTACATCAT 66106 Query 77128 CAGGGCTGAACAGTGTGATGTAATCGTTATTGATTAAACGCTTATACATCAAATCGTTAA 77187 ||||||||||| || || | ||||| | | || |||||||| ||| | Sbjct 66107 GCGGGCTGAACAGCGTAATATTCTCGTTGCGTACCAGGCGGCGATACATCAGGCGGTTGA 66166 Query 77188 GCTGAACGCCATAATCCAGGTGACGAATACGGTTATTCTCAACACCTTTGTTGTTTTTCA 77247 | |||||||| ||||| ||||||| |||||| | ||| | || ||| || |||| Sbjct 66167 TCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCA 66226 Query 77248 GAACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATACAACGTTGCAGCACCAC 77307 |||||||| |||||||||||| |||||| || || || | ||| || || |||| Sbjct 66227 ATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCAC 66286 Query 77308 CACGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATATGTTTCCAGAACGGGA 77367 | ||||||||||| || || || ||||| || || ||||| | |||||| || |||| Sbjct 66287 CTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCAGAAAGGGGA 66346 Query 77368 TCACGCCTGTATGTACTGCTTCACCACCACGGATTTTAGAACCCATTGCGCGAATGTGTC 77427 | ||||| || || ||||| ||| ||||| | | |||| ||| || | | | Sbjct 66347 TTACGCCAGTGTGGGTGGCTTCTCCATTGCGGATCTCACTCCCCAATGCACGCAGTCGGC 66406 Query 77428 CAGCATTAACACCGATACCCGCGCGTTGTGAAATATACTTCACGATCGCAGAGGTTACAG 77487 || | || || || || || || | || | || | | || ||||||| ||| Sbjct 66407 CAAAACCAATCCCAATGCCAGCACGACGCGACACGTAATCGATAATGGCAGAGGACGCAG 66466 Query 77488 CATTCAGAGAACCCAGTGAA----TCACCTGATTCAATCACTACGCAACTGGAAAACTGA 77543 | | || ||| | || || | || ||||||| ||||| ||||| ||||| Sbjct 66467 CGCT----GATCCCTTTCAAACTGTCTTCGGACTCAATCAGAACGCAGCTGGAGAACTGG 66522 Query 77544 CGCGTAGGAGTACGCACACCCGCCATAATAGGCGTAGGTAACGACA 77589 ||||| || ||||| || || ||||| || || || || | |||| Sbjct 66523 CGCGTCGGGGTACGGACGCCGGCCATGATTGGGGTGGGCAGAGACA 66568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568461008309760