Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq1 250 4e-61 >seq1 Length=107950 Score = 250 bits (276), Expect = 4e-61 Identities = 327/444 (74%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 88169 CTCTGGAAACCAAGCAACTCATCTTCTCCACAGGGGAAGCCGGATGCGGTAAGACCTTCA 88228 |||| || | ||| ||| | |||| |||| || |||||||| |||||||| |||||| Sbjct 96078 CTCTTGATAGCAAAGCACTGACCTTCGCCACTGGCGAAGCCGGCTGCGGTAAAACCTTCC 96019 Query 88229 TGGCCACCGCCTACGCGGTAGAGCGATTACTGGCCAAAGACGTCGATCGTATCATTGTCA 88288 |||| || ||| ||||| | |||||||||| | || || || || || || || || | Sbjct 96018 TGGCGACTGCCGTCGCGGCACAGCGATTACTCGATAAGGAAGTAGAGCGAATTATCGTTA 95959 Query 88289 CTCGCCCTGTCCTCTCCGCAGATGAAGACTTAGGCTTCCTGCCGGGCGATGTTGGTGAAA 88348 | |||||||| || ||||| || || || ||||||||||| |||||| | | || | Sbjct 95958 CGCGCCCTGTACTGCAGGCAGAGGAGGATTTGGGCTTCCTGCCTGGCGATATGGCCGAGA 95899 Query 88349 AGTTCGCGCCTTACTTCCGACCTGTTTACGATGTGCTCTTAAAACGTCTGGGCAGC--CG 88406 ||||||| || | ||| || || || ||||||||||| || || |||||| || | Sbjct 95898 AGTTCGCTCCGTTCTTTCGTCCCGTCTACGATGTGCTGCAGAAGCGCCTGGGC-GCTTCA 95840 Query 88407 TTTCTTACAATACTGCCTGAAACCGGGTATAGACAAGGTTGAGATAGCTCCCTTCGCCTA 88466 |||| | |||||||||| || || | | | || || ||||| || |||||||| || Sbjct 95839 TTTC-TCGAATACTGCCTAAAGCCTGAGGTGGCTAAAGTCGAGATCGCCCCCTTCGCATA 95781 Query 88467 TATGCGTGGCCGCAACTTCGAGAACGCGGTCGTTATCTTAGATGAAGCTCAGAACACCAC 88526 ||||| || |||| ||||| ||||| || || ||| | ||||| || |||||| || Sbjct 95780 CATGCGCGGTCGCACGTTCGAAAACGCTGTGGTGATCCTCGATGAGGCCCAGAACGTGAC 95721 Query 88527 TGC-TCAGCAGATGAAGCTCTTCCTGACCCGTATCGGGGAGAACTGTATC-GTTATCGTT 88584 || ||| || |||||| | |||||||| || || || |||||| ||| | || ||||| Sbjct 95720 GGCGTCA-CAAATGAAGATGTTCCTGACTCGGATGGGTGAGAAC-GTAACGGTCATCGTG 95663 Query 88585 AACGGTGACGTCACTCAGTGCGAC 88608 || ||||| || || || |||||| Sbjct 95662 AATGGTGATGTGACGCAATGCGAC 95639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716448130322400