Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031011.1 Length=168993 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 >seq1 Length=107950 Score = 134 bits (148), Expect = 1e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 38208 ACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACG 38267 || ||||| |||| |||||||| ||||| || || | ||| |||||| ||||| || Sbjct 66172 ACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCAATACC 66231 Query 38268 AGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGA 38327 || ||| |||||||||||| |||||||||||| || |||| || || ||||| || ||| Sbjct 66232 AGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGA 66291 Query 38328 ATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAAAGGAATAACA 38387 | || ||||| || ||||| || || || | ||| || |||||| ||| || || || Sbjct 66292 ACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCAGAAAGGGGATTACG 66351 Query 38388 CCAG 38391 |||| Sbjct 66352 CCAG 66355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540637624611360