Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=107950 Score = 100 bits (110), Expect = 3e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 139649 ACACCATAATCTAAATGACGAATACGGTTTTCATCGATACCTTTATTATTCTTCAGTACG 139708 || ||||| || | |||||||| |||||| || ||||| || |||||||||| ||| Sbjct 66172 ACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTATTCTTCAATACC 66231 Query 139709 ATTAATTTTTCATATTCCAGATGCCACATCGGATAATATAATGTCGCCGCACCACCACGT 139768 | | ||||| |||||||||||| || || || | ||||| || ||||| || Sbjct 66232 AGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTGCGCCACCTCGA 66291 Query 139769 ACACCACCTTGTGAACATGATTTCACTGATGCCTGATGAGTTTTCCAG-AATGGAATAAC 139827 || ||||| || || ||||||||||| | | ||| ||| || ||| || || || || Sbjct 66292 ACGCCACCCTGCGAGCATGATTTCACAGCGGTCTG-GAAGTGTTTCAGAAAGGGGATTAC 66350 Query 139828 ACCAGTGTG 139836 |||||||| Sbjct 66351 GCCAGTGTG 66359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522103635148320