Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq319 273 3e-68 >seq319 Length=25483 Score = 273 bits (302), Expect = 3e-68 Identities = 1144/1778 (64%), Gaps = 66/1778 (4%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| ||||||||||||||||| |||| ||| |||||| |||||||||||| Sbjct 8403 GTACGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAG 8344 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || ||||||| | | | || || || || || ||| | || |||||||||||| Sbjct 8343 GTGAGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATG 8284 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 ||||| || | |||||| ||||| | || | || ||||| |||||||||||| |||| Sbjct 8283 AAAGCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGAATTTCCCAAACAGTT 8224 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTATT---TTGAATGGAACCACCATCT 77048 || | | || ||| | ||||| || | | | | |||||||||||||| || Sbjct 8223 TTATAGAGTTCTTTCAATTCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGCT 8164 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCT-CTCTGTTAAAAC-TCTAA 77106 | || ||| ||||| || || |||| ||| || ||| | | | | |||| Sbjct 8163 GCAATGATTTGGTTCTTCATCTCTGGTGTCCA-AATACCCAACTCCATGAGATCCTCTA- 8106 Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166 | | || ||| || ||| ||||| |||| || || | |||| |||||||||| Sbjct 8105 GTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTTG 8046 Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226 || |||||||| | | |||||||||| || | |||||| || ||||| ||||||| Sbjct 8045 AAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCA 7986 Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGA---TTTTATCTTTTAGAT 77283 | ||||| | || | || | | |||| | | ||| | ||||| |||| | Sbjct 7985 TTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAATT 7926 Query 77284 ATTTCCAATCCCAAAGATCTGAA---GGTACAACATCCCAAAGATCGTATTGTAGAATTC 77340 | |||||| |||| | |||| ||| ||||| ||| | ||| ||||| || || | Sbjct 7925 CTGTCCAATTCCAACG---TGAACTTGGTGTAACATTCCACATATCATATTGAAGGATAC 7869 Query 77341 CGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCAC 77400 | ||| ||| ||| || | | | ||||||||| || || | || | |||| Sbjct 7868 CTTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTCAT 7809 Query 77401 AACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT- 77459 | ||| || || || ||||||| ||||| || | ||| | || | | Sbjct 7808 GAGAGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTA-ATTTGGCA 7750 Query 77460 GCTTCAATACTATCAAACGG-ATA---ATGTAAAAGAATAAAGGCATCTGCTAATCCCTG 77515 || ||| |||||| || || ||| || | || ||| | |||||||||| || || Sbjct 7749 GCGGCAACACTATCGAAAGGCATACGCATTTTAATGAAAA----CATCTGCTAAACCTTG 7694 Query 77516 AACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATA 77575 || ||||||||||| || | |||||| ||| || ||||||| || || ||||| Sbjct 7693 AATACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGCCTCGATAACTGGATA 7634 Query 77576 ATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAG 77635 ||| ||| || || || ||| |||||| | || ||| | || || Sbjct 7633 ATAGTTACGATCAATGATAACATTAAGATTTACTGTGATTAATTTGGTGATTTCAAAGAG 7574 Query 77636 ---TTTAAG---AAAATCAAA-TCTT--------------CCATCTATA--ACAAAC--A 77670 || | | ||| ||||| |||| || || | || || | Sbjct 7573 GAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAATGAA 7514 Query 77671 TGTTCAAAG--CTATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTTGGCATATT 77727 | || ||| | ||||| || ||||||||||| || | |||| | | | || ||||| Sbjct 7513 TTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGT-ATATT 7455 Query 77728 GTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 | || || || ||||| |||||||||| | || || || | ||| | ||| ||| | Sbjct 7454 GAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATT 7395 Query 77788 TTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 | |||||| | |||||||| | || || || || || ||||||| || ||||| | Sbjct 7394 TGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATTCCA 7335 Query 77848 TAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT-TTGTATCGCCTC-TCTCT-TT 77904 |||| | ||| | || |||||| || ||| | ||| |||| | | || Sbjct 7334 TAATGGCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTGGCTT 7275 Query 77905 CATATTG--AGTATATAGC-CGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 |||||| |||| | ||| || | |||| | ||| | | || || Sbjct 7274 CATATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTG---AGTTTCAGCAAGACCTGGTG 7218 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 ||| ||||| || | | | ||| ||||||| || | || || | |||||||| || Sbjct 7217 CTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATAT 7158 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 || | ||| || ||| || || |||| | ||| || || || || || || | Sbjct 7157 CACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGTTTT 7098 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 | || ||||| | || || | | ||| | |||||||| || | || | || | Sbjct 7097 TCTTGAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAAGG 7038 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | || || || ||| || ||||| | || | || || | ||| |||| | | Sbjct 7037 CACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAA 6978 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 |||||| | | ||| || || ||||| || ||| |||||||||| | || | Sbjct 6977 GCATTGGTACCAAACCATTGCTAGTACCATTGGTACCACGAATATAACTTTGAGCAGCAC 6918 Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321 |||| ||| || || || || || || || || |||| || || || ||||| ||| Sbjct 6917 GAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATTGTT 6858 Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 |||| |||||||||||||| || || || || |||| | || | ||||| || Sbjct 6857 TCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAACAAGAAG 6798 Query 78382 ACATTTGATGATGA-ACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 ||||||| || ||| || |||||||| ||||| || || | ||||| || || || Sbjct 6797 ACATTTG-TGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAATAAT 6739 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 || || || | | |||||||| | ||||| || || ||||| ||| || || Sbjct 6738 TTCTCTGATAAACGTTTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGATACCA 6679 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 | | |||||||||||||| || || || | ||| || Sbjct 6678 ATTGAAACACGCATCAACATGTGTTGTGGACGTTCGAC 6641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694653413086080