Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq319 230 3e-55 >seq319 Length=25483 Score = 230 bits (254), Expect = 3e-55 Identities = 1134/1781 (64%), Gaps = 72/1781 (4%) Strand=Plus/Minus Query 75407 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 75466 ||||| ||||||||||||||||| |||| ||| |||||| |||||||||||| Sbjct 8403 GTACGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAG 8344 Query 75467 GTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 75526 || ||||||| | | | || || || || || ||| | || |||||||||||| Sbjct 8343 GTGAGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATG 8284 Query 75527 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 75586 ||||| || | |||||| ||||| | || | || ||||| |||||||||||| |||| Sbjct 8283 AAAGCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGAATTTCCCAAACAGTT 8224 Query 75587 TTGAAAACTTGTTTGATATCATCTGGAAGATT-------TGTATTTTGAATGGATCCGCC 75639 || | | || ||| | ||||| || ||| || ||| ||||||| || | Sbjct 8223 TTATAGAGTTCTTTCAATTCATCAGG--GATGCCACCAATGGATT--GAATGGAACCACG 8168 Query 75640 ATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCT-CTCGGTTAAAAC-T 75697 | | || ||| ||||| ||||| |||| ||| | ||| | | | | | Sbjct 8167 TGCTGCAATGATTTGGTTCTTCATCTCTGGTGTCCA-AATACCCAACTCCATGAGATCCT 8109 Query 75698 CTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATA 75757 ||| | | || ||| |||||| ||||| |||| || || | ||| |||||||| Sbjct 8108 CTA-GTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATA 8050 Query 75758 TTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTC 75817 || || |||||||| | | |||||||||| || | |||||| |||||||| || Sbjct 8049 TTTGAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTT 7990 Query 75818 GGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGA---TTTTATCTTTT 75874 ||||| ||||| | || | || | | |||| | | ||| | ||||| ||| Sbjct 7989 GGCATTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTT 7930 Query 75875 AGATATTTCCAATCCCAAAG--ATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | | | |||||| |||| | | || |||| ||||| ||| | ||| ||||| || | Sbjct 7929 AATTCTGTCCAATTCCAACGTGAACT--TGGTGTAACATTCCACATATCATATTGAAGGA 7872 Query 75933 TTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTT 75992 | || || ||| ||| || | | | ||| |||| || || | || | || Sbjct 7871 TACCTTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATT 7812 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 | | || ||| ||| || ||||||| ||||| || | ||| | || | Sbjct 7811 CATGAGAGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTA-ATTTG 7753 Query 76053 GC-GCTTCAAGACTATCAAAAGG-ATA---ATGTAAAAGAATAAATGCATCTGCTAGTCC 76107 || || ||| |||||| ||||| ||| || | || ||| | ||||||||| || Sbjct 7752 GCAGCGGCAACACTATCGAAAGGCATACGCATTTTAATGAAAA----CATCTGCTAAACC 7697 Query 76108 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGG 76167 |||| ||||||||||| || | |||||| ||| || ||| ||| || || || Sbjct 7696 TTGAATACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGCCTCGATAACTGG 7637 Query 76168 GTAATAATTAATATCTATAATTTTATTGAGATTT-CTGACAACTACTTTAACCACGTCCT 76226 ||||| ||| ||| || || ||| |||||| ||| | || ||| | || Sbjct 7636 ATAATAGTTACGATCAATGATAACATTAAGATTTACTGTGAT-TAATTTGGTGATTTCAA 7578 Query 76227 TTAGT--TTGAG----AAAATCAAA---TTTTCCATC--------------TATCACAAA 76263 || |||| ||| ||||| |||| || | | || || Sbjct 7577 AGAGGAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAA 7518 Query 76264 CATATT----AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCAT 76319 ||| ||| || ||||| || |||||||||||||| | |||| | | || Sbjct 7517 TGAATTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGTAT 7458 Query 76320 ATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGC 76379 |||| || || || || || |||||||||| | || || || | ||| | ||| ||| Sbjct 7457 ATTGAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGG 7398 Query 76380 TCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATT 76439 || || || | |||||||| | | || || || |||||||||| || |||| Sbjct 7397 ATTTGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATT 7338 Query 76440 CGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTT--GTATCGCTTCTCTCT 76497 | ||||| | ||| | || |||||| |||||| | | ||| || | | Sbjct 7337 CCATAATGGCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTGG 7278 Query 76498 -TTCATATTGT--GTATATAAC-CGTTCAAATTCATCTCCCCAAACATCATCCAAACCAG 76553 |||||||| ||| | | | || | |||| | ||| | | ||| | Sbjct 7277 CTTCATATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTG---AGTTTCAGCAAGACCTG 7221 Query 76554 GACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGA 76613 | ||| || ||||| | | | ||| ||||||| || | || || | |||||||| Sbjct 7220 GTGCTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGA 7161 Query 76614 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTAT 76673 |||| | ||| || ||| || || |||| | ||| || || || || || | Sbjct 7160 TATCACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGT 7101 Query 76674 TCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 76733 | || || ||||| | ||| || | | ||| | |||||||| || | || | || | Sbjct 7100 TTTTCTTGAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAA 7041 Query 76734 TAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTC 76793 |||| || || ||| || ||||| | || | ||||| | ||| |||| | Sbjct 7040 AGGCACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACAC 6981 Query 76794 TCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATG 76853 | |||||| | | || || |||||||| || ||| |||||||||| | | Sbjct 6980 GAAGCATTGGTACCAAACCATTGCTAGTACCATTGGTACCACGAATATAACTTTGAGCAG 6921 Query 76854 CACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 ||||||| ||| || | | || || || || || | || ||||| || || || Sbjct 6920 CACGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATT 6861 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 ||||||| || || ||||| || || || ||| || |||| | || | ||||| Sbjct 6860 GTTTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAACAAG 6801 Query 76974 TAGACATTTGATGATGAACA-GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 ||||||||| || ||| || |||||||| || || || || | ||||||||||| Sbjct 6800 AAGACATTTG-TGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAAT 6742 Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATT 77092 |||| || || | | |||||||| | ||| | | || || || ||| || Sbjct 6741 AATTTCTCTGATAAACGTTTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGATA 6682 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133 || | | |||||||||||||| || || || ||||| || Sbjct 6681 CCAATTGAAACACGCATCAACATGTGTTGTGGACGTTCGAC 6641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712918608503040