Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 >seq1 Length=107950 Score = 181 bits (200), Expect = 2e-40 Identities = 344/495 (69%), Gaps = 10/495 (2%) Strand=Plus/Minus Query 88095 CCCTATTGAGGCCCGCAATGAAAACCAGCAGCAATACATGAATGCGCTGGAAACCAAACA 88154 ||| || ||||| ||||| ||| |||| || || | | | || || | |||| Sbjct 96122 CCCCATAGAGGCACGCAACGAAGCCCAGGCCCACTATCTTATCTCTCTTGATAGCAAAGC 96063 Query 88155 ACTGATATTCGCCACCGGTGAAGCAGGGTGCGGTAAAACATTCCTTTGCGCC-GCCTACG 88213 ||||| |||||||| || ||||| || ||||||||||| ||||| ||| | ||| || Sbjct 96062 ACTGACCTTCGCCACTGGCGAAGCCGGCTGCGGTAAAACCTTCCTG-GCGACTGCCGTCG 96004 Query 88214 CTGCCGAACGTCTACTGGCAAAAGACTTTGACCGTATCATTGTCACCCGTCCAGTCCTCT 88273 | || | || |||| | || || | || || || || || || || || || || Sbjct 96003 CGGCACAGCGATTACTCGATAAGGAAGTAGAGCGAATTATCGTTACGCGCCCTGTACTGC 95944 Query 88274 CTGCAGATGAAGACCTTGGCTTCTTGCCCGGCGACGTCTCAGAGAAGTTCGCCCCTTACT 88333 ||||| || || | |||||| |||| ||||| | | ||||||||||| || | || Sbjct 95943 AGGCAGAGGAGGATTTGGGCTTCCTGCCTGGCGATATGGCCGAGAAGTTCGCTCCGTTCT 95884 Query 88334 TCCGTCCTGTCTACGACGTGCTAAGCAAACGCTTAGGTG-GTCAATTCTTACG-CTACTG 88391 | ||||| |||||||| ||||| || ||| | || | ||| |||| || ||||| Sbjct 95883 TTCGTCCCGTCTACGATGTGCTGCAGAAGCGCCTGGGCGCTTCATTTCT--CGAATACTG 95826 Query 88392 TTTAAAGCCGGGAATTGACAAGGTAGAGATTGCTCCCTTCGCCTACATGCGCGGACGTAG 88451 ||||||| | | | || || ||||| || |||||||| ||||||||||| || | Sbjct 95825 CCTAAAGCCTGAGGTGGCTAAAGTCGAGATCGCCCCCTTCGCATACATGCGCGGTCGCAC 95766 Query 88452 CTTTGAAAATGCAGTCATTTTATTAGATGAAGCTCAGAACACTACTGC-TCAGCAGATGA 88510 || ||||| || || | | | ||||| || |||||| || || ||| || |||| Sbjct 95765 GTTCGAAAACGCTGTGGTGATCCTCGATGAGGCCCAGAACGTGACGGCGTCA-CAAATGA 95707 Query 88511 AGCTCTTCCTGACACGTATCGGGGAGAACTGTCTC-GTGATTGTCAATGGCGATATTACT 88569 || | |||||||| || || || |||||| || | || || || ||||| ||| | || Sbjct 95706 AGATGTTCCTGACTCGGATGGGTGAGAAC-GTAACGGTCATCGTGAATGGTGATGTGACG 95648 Query 88570 CAGTGCGACTTACCG 88584 || |||||| | ||| Sbjct 95647 CAATGCGACCTGCCG 95633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734258935804320