Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-32 >seq1 Length=107950 Score = 152 bits (168), Expect = 6e-32 Identities = 144/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 152203 CCATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGACTGCTGTTAAATCATGCTCACA 152262 ||| ||||| || || || ||| |||||| || ||||| ||||| ||||||||||| || Sbjct 66360 CCACACTGGCGTAATCCCCTTTCTGAAACACTTCCAGACCGCTGTGAAATCATGCTCGCA 66301 Query 152263 GGGTGGAATTCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGA 152322 |||||| |||| || ||||| || || |||| || |||||||||||| |||||||||| Sbjct 66300 GGGTGGCGTTCGAGGTGGCGCAGCGACGGCTTTCTACCCTATTTGGCATCTGGAAGTTGA 66241 Query 152323 AAATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAAGAAAACCGCATCCGTCATATGGA 152382 || ||| || || ||||| |||||| ||| | || || ||||| | |||||| |||| Sbjct 66240 AAGTCTGCTGGTATTGAAGAATAACCGCGGCATCGAGGAGAACCGTGTTCGTCATCTGGA 66181 Query 152383 TTAT 152386 ||| Sbjct 66180 CTAT 66177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546323898657600