Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=107950 Score = 154 bits (170), Expect = 2e-32 Identities = 351/526 (67%), Gaps = 14/526 (3%) Strand=Plus/Minus Query 43391 TGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTT 43450 |||| | || || || || ||||| || || ||||| || ||||| ||||| ||||| | Sbjct 66568 TGTCTCTGCCCACCCCAATCATGGCCGGCGTCCGTACCCCGACGCGCCAGTTCTCCAGCT 66509 Query 43451 GCGTAGTGATTGAATCAGGTGA----TTCACTGGGTTCTCTGAATGCTGTAACCTCTGCG 43506 |||| ||||||| || | || || | ||| || | |||| ||||||| Sbjct 66508 GCGTTCTGATTGAGTCCGAAGACAGTTTGAAAGGGATC----AGCGCTGCGTCCTCTGCC 66453 Query 43507 ATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCA 43566 || | | || | || | || || || || || || | ||| | | || ||| Sbjct 66452 ATTATCGATTACGTGTCGCGTCGTGCTGGCATTGGGATTGGTTTTGGCCGACTGCGTGCA 66393 Query 43567 ATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAA 43626 |||| | | ||||| ||| ||||| || || ||||| ||||| || |||| Sbjct 66392 TTGGGGAGTGAGATCCGCAATGGAGAAGCCACCCACACTGGCGTAATCCCCTTTCTGAAA 66333 Query 43627 CATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACG 43686 || | ||||| || || ||||| || || || ||||||||||| ||||| || || ||| Sbjct 66332 CACTTCCAGACCGCTGTGAAATCATGCTCGCAGGGTGGCGTTCGAGGTGGCGCAGCGACG 66273 Query 43687 TTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAA 43746 | || || || |||||| |||||||||||| |||||||| |||| || ||| Sbjct 66272 GCTTTCTACCCTATTTGGCATCTGGAAGTTGAAAGTCTGCTGGTATTGAAGAATAACCGC 66213 Query 43747 GGTGTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATG 43806 || | ||| | |||||| ||||||| ||||| |||||||| | | ||| ||||| Sbjct 66212 GGCATCGAGGAGAACCGTGTTCGTCATCTGGACTATGGCGTAATGATCAACCGCCTGATG 66153 Query 43807 TATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCCCTGACGTTGCAAATGAT 43866 ||| || | | ||||| | || || ||||||||||| | | || | | Sbjct 66152 TATCGCCGCCTGGTACGCAACGAGAATATTACGCTGTTCAGCCCGCATGATGTACCGG-- 66095 Query 43867 CGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAAG 43912 | || ||||||||||||| | | ||||||| | ||||||| Sbjct 66094 -GGCTCTATGATGCTTTCTTT---GTTGATCAGGACAAATTCGAAG 66053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576560028912480