Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-26 >seq1 Length=107950 Score = 132 bits (146), Expect = 5e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 141245 CATCAGGTTATTAATCTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACC 141304 ||||||| || ||| |||||||| || | |||||||| |||||| || || | || Sbjct 66153 CATCAGGCGGTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCC 66212 Query 141305 TTTGTTGTTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAG 141364 ||| ||||| | ||| || || |||||||||||| ||||| || || ||| | Sbjct 66213 GCGGTTATTCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGC 66272 Query 141365 TGTCGCCGCGCCACCACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTG 141424 ||||| |||||||| || || ||||| || ||||| ||||| || || || |||||||| Sbjct 66273 CGTCGCTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTG 66332 Query 141425 TTTCCAGAAA-GGAATAACTCCAGTATGTTTGACTTCACC 141463 ||| |||||| || || || ||||| || || |||| || Sbjct 66333 TTT-CAGAAAGGGGATTACGCCAGTGTGGGTGGCTTCTCC 66371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538330475715840