Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq1 255 4e-63 >seq1 Length=107950 Score = 255 bits (282), Expect = 4e-63 Identities = 306/416 (74%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 98663 CCATCAGATATACTGTTCCAGTGGCAATTGAAGAGCCTGGGCAATTTTCTTCAATTGCTC 98722 |||| |||| ||| ||||| | || || || ||||| ||||||||||||| | Sbjct 53994 CCATTAGATGTACGCATCCAGAGATAACTGCAGCGCCTGAGCAATTTTCTTCAGCACAAC 54053 Query 98723 CTGCTCTTCTGCCCCAATGCCATCCTGGTCAGCAATATCAATGCATAGGCACAGAACATC 98782 || |||||| | || ||||||||||| || |||||||| | ||| || |||| ||||| Sbjct 54054 CTCTTCTTCTTCGCCGATGCCATCCTGATCGGCAATATCCAGGCAGAGACACAACACATC 54113 Query 98783 TACCGCATCATTAGTTCCAGACACGTCAGCCAGTTCACGTAAAGCCTGGGCATTCGCTCG 98842 || || || ||| || | || |||||||| || || | |||||| || || || Sbjct 54114 AACGGCTTCTGGAGTGCCGGCGACATCAGCCAGCTCCCGAAGAGCCTGTGCGTTGGCGGA 54173 Query 98843 GCGCGGCGAGGCTTCATATTGAGCGCGAATATTGGCGCTCATCTGGGCAATTTCACCGGA 98902 || || || |||||||| |||| ||||||||| ||||||||| || || ||||| | Sbjct 54174 ACGAGGAGAAGCTTCATAGCGAGCACGAATATTGCTGCTCATCTGCGCGATCTCACCCGC 54233 Query 98903 GAACGGCGCAAAGGCAGGAAGTGCTGCAATGGTTTTTTCCAATACTGCAATTTCTTTCGC 98962 |||||| | ||||| || | ||| | ||||| || |||| | || |||||||| || Sbjct 54234 GAACGGTGAGAAGGCTGGCAATGCGGAGATGGTCTTCTCCAGAATAGCGATTTCTTTTGC 54293 Query 98963 ATCGCAGGTGCCGTCAGAGTATGCAATGGAATATGCGCCCCAGACAGTCGCTTCCACCGC 99022 ||| ||| ||||||| | || || || ||||||||||||||||| ||||| ||||| Sbjct 54294 ATCACAGTTGCCGTCTGCATAAGCGATCATGTATGCGCCCCAGACAGTAGCTTCGACCGC 54353 Query 99023 ATCACGGTTTTCCATCTTCTTGACTCCGCCAGCCGCTTTGCGGAATTTCTTTTTGA 99078 ||| ||||| ||||| || || ||| | | ||||||| || ||||||||||| Sbjct 54354 ATCGCGGTTCTCCATTTTTTTAACTTCAATAACCGCTTTACGAGTTTTCTTTTTGA 54409 Score = 116 bits (128), Expect = 2e-21 Identities = 166/223 (74%), Gaps = 18/223 (8%) Strand=Plus/Plus Query 99404 GTTGTGAAGCCAGATGCTTATCTTCTGGTTGCTTCAAAGAGCTGCACTTCATCACAACGG 99463 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 96639 GTTGTGACGCCAGATGCTTATCTTCTGGTTGCTTCAACGAGCTGCAATTCATCACAACGG 96698 Query 99464 TAAGGGTACTTCGTAGGGATTC-GAACCCT------CTGCC-AAGCTCG-GCGATCTCCG 99514 |||||| | ||| ||||| || || || | | ||| ||| || || || | Sbjct 96699 TAAGGG-AATTC--AGGGAATCAGATCCGTCGCGAACAGCCAAAGAGCGCGCCTTCCTTG 96755 Query 99515 ACGTCG-CAAAATACCCTTACCTGTTGTGCTGGTGCCGATTAACGGACTCGAACCGCTGA 99573 |||| | ||||||||||||| |||||| | || | | ||| ||||||| | || Sbjct 96756 CTGTCGTCCAAATACCCTTACC-GTTGTGGCGATGGTGGGT---GGATTCGAACCACCGA 96811 Query 99574 CATCCTGCTTACAAGGCAGGCGCTCTACCAACTGAGCTAAACC 99616 | || ||| || || ||||||||| ||||||||| ||| Sbjct 96812 CCAGTTGATTAACAGTCAACCGCTCTACC-ACTGAGCTACACC 96853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330892053818152