Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=107950 Score = 154 bits (170), Expect = 2e-32 Identities = 200/271 (74%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 143317 TCATGAGGACTAAACAGAGTAATGTAATCATT-CTTACCGAAACGTTCCAT-CATCAGGT 143374 ||||| || || ||||| ||||| | || || | |||| | || | || ||||||| Sbjct 66103 TCATGCGGGCTGAACAGCGTAATATTCTCGTTGCGTACC-AGGCGG-CGATACATCAGGC 66160 Query 143375 CGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGT 143434 ||| | | | |||||||||| |||||||| ||||||||| |||| || ||| | Sbjct 66161 GGTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGTTAT 66220 Query 143435 TTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAG 143494 | |||| || |||||| |||||||||||| |||||||||||| || |||| || || | Sbjct 66221 TCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCGCTG 66280 Query 143495 CGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGA 143554 |||| || || | ||||| || || |||||||| ||||| |||||||| |||||| | Sbjct 66281 CGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCAGAA 66340 Query 143555 ATGGAATAACACCGGTATGCTTGACTTCGCC 143585 | || || || || || || || |||| || Sbjct 66341 AGGGGATTACGCCAGTGTGGGTGGCTTCTCC 66371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543655157771520