Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_031930.1 Length=59518 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 8e-12 >seq1 Length=107950 Score = 84.2 bits (92), Expect = 8e-12 Identities = 172/251 (69%), Gaps = 10/251 (4%) Strand=Plus/Minus Query 40755 GGGATTCGCAATAACAACCCCGGCAACATCGAATGGGGGTCGCCGTGGCAAGGGCTGATC 40814 || ||||| || || ||||| || ||| | || ||||||||||||||||||| | | Sbjct 107876 GGCATTCGTAACAATAACCCTGGTAACCTGGATAAGGGGTCGCCGTGGCAAGGGTTAGT- 107818 Query 40815 CCGCGTAACGAGGCGACGG-ACAGCCGCTTCGCACAGTTCAAAGACCCGGCATCTGGCAT 40873 ||| | || ||| || || | | |||| || |||||||| | || || || Sbjct 107817 -----AAACAATCCGGCGGAACCGCGGTTCTGCAC-TTTTAAAGACCCCGTATGGGGGAT 107764 Query 40874 CCGCGCCATTGCCGTCACCCTGACCACCTACTACGACAAGCGCAAAGCGAACGACGGCAG 40933 || || | | || || || | ||||||| | || |||||| || || ||||| Sbjct 107763 TCGAGCACTGACAGTAACGCTCATCACCTACCATGATAAGCGCCGCGCAAAAGACGGTTC 107704 Query 40934 CAAAATCGACTCGGTGCGCGAAGTGATCGAGCGGTGGGCACCTGCCG-TCGAGAACAACG 40992 || ||||| || | |||||||| |||||||| ||||| || |||| || |||||| Sbjct 107703 CAGCATCGATACGATCCGCGAAGTCATCGAGCGTTGGGCGCC-GCCGCATGAAAACAACA 107645 Query 40993 TGTCTGCCTAT 41003 | | |||||| Sbjct 107644 CGGCCGCCTAT 107634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190331994854720