Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq126 206 6e-48 seq595 149 1e-30 seq915 95.1 3e-14 seq1600 93.3 9e-14 seq1037 93.3 9e-14 seq747 91.5 3e-13 seq1592 89.7 1e-12 seq826 89.7 1e-12 seq401 89.7 1e-12 seq52 89.7 1e-12 seq1719 84.2 5e-11 seq344 84.2 5e-11 >seq126 Length=461790 Score = 206 bits (228), Expect = 6e-48 Identities = 293/410 (71%), Gaps = 4/410 (1%) Strand=Plus/Minus Query 61082 AATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGA 61141 ||| | |||||| || |||||||| ||||||| |||||| | | |||||||| |||| Sbjct 313817 AATATATCAAGCTTCTACATCTGAGTTGTATGGCTTAGTTCAGGCAGTTCCTCAATCAGA 313758 Query 61142 AAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT 61201 ||| ||||| |||||||||||| || |||| ||||||||| | || ||||| ||||| Sbjct 313757 AAGCACTCCTTTTTATCCTCGTTCTCCTTATGCAGTTGCAAAAATGTATGCTTATTGGAT 313698 Query 61202 TTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCA 61261 | |||||| | || | ||||| ||||||| || || |||| || ||||| Sbjct 313697 TACCGTAAATTATAGAGAAGCATATGGTATGTTTGCGTGCAATGGTATTTTATTTAATCA 313638 Query 61262 CGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGC--A 61319 || ||||| ||||| | ||||| |||||||||||||| | |||||| | | Sbjct 313637 TGAAAGTCCTTTAAGAGGAGAAACTTTTGTCACTCGTAAAATTACTAGAGCGGTTTCTAA 313578 Query 61320 AATATTTTTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGAT 61379 ||| ||| || | | ||| | | | |||||||| |||| | | ||||||| Sbjct 313577 AATGGCATTAGGTATGCAGGATAAT--TTATTTTTAGGAAACTTAGATGCGAGAAGAGAT 313520 Query 61380 TGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCA 61439 ||||| |||| |||||||| | |||||||||||| |||| ||||| |||||| || Sbjct 313519 TGGGGGCATGCAAAAGATTATGTTGAGGCTATGTGGCTGATTTTGCAGCAAGATCAACCT 313460 Query 61440 GATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTGAATTCGT 61489 || || || || ||||| ||||| || || | ||| ||||| || || Sbjct 313459 GAAGATTATGTAATTGCAACTGGTGTTACTACTACTGTTCGTGATTTTGT 313410 >seq595 Length=202500 Score = 149 bits (164), Expect = 1e-30 Identities = 381/579 (66%), Gaps = 6/579 (1%) Strand=Plus/Minus Query 150607 TTGCTTCGTAGAACTTCCTAATCAGAACCGGGAATACATGTCCATTTTGTAGGTCATAAC 150666 |||| || | |||| | | ||||| |||||| |||||| |||||| | | ||| Sbjct 36031 TTGCCTCATGGAACCTGCGGATCAGCGCCGGGAGTACATGCGAGTTTTGTGGATGGTAAT 35972 Query 150667 GGTCGTTTGGGCCACTGAGGTTCGTCGGCATTACTGACACGAAATTACAACCGAATTGTT 150726 ||| || || | || || ||||| || || | ||||||||||||| | || Sbjct 35971 TGTCATTATACCCGTATAAATTGGTTGGCATGACGGAGATGAAATTACAACCGTACTGGG 35912 Query 150727 TTCTGTAGGCGTCGCACATTTCGATTCCGGCTATCTTCGCTATCGCGTATGGTTTGTTAG 150786 ||||||||||| ||||||| || ||||| || || || || || || |||| || | Sbjct 35911 CCCTGTAGGCGTCACACATTTTAATACCGGCAATTTTTGCAATGGCATAGGGTTCATTGG 35852 Query 150787 TAGGTTCGAGAAACCCGGTCATCAGGTATTCTTCTTTGATGGGGTTTGGGGATTCTTTCG 150846 | ||| || || || || | ||||||||||| || | ||| | ||||| | |||| Sbjct 35851 TTTCTTCCAGCAAGCCAGTAAGAAGGTATTCTTCCTTCAGGGGCTGTGGGGCTAACTTCG 35792 Query 150847 GGTATATACAGCTACTCCCGAGGAAAACGAGTTTTTTCACATTGAATGTTTT---AGAAG 150903 |||| ||||| || || ||||| | | ||||| | || |||| || Sbjct 35791 GGTAAATACAACTGGAACCCAGGAACATTAACTTTTTGA---TGCCGTTTTTCCATGACT 35735 Query 150904 CGTGGATAACGTTCGTTTGAATCATCAGGTTGTCACGAATAAAATCACCACCAAAAGAAT 150963 | ||||| || || | ||||| || || || || |||||| | | | | | Sbjct 35734 CATGGATCACATTGTTCTGAATAGCAAGATTTTCGTAAAGAAAATCTGCCCTGTAGGTGT 35675 Query 150964 TGTTTGCATGAATACCCCCTACTTTGGCAGCGGCGAGAAATACGTATTCTGGTGTTTCCA 151023 |||| ||| ||| || || |||||||| || ||||||||||| || || ||| ||||| Sbjct 35674 TGTTGGCAATAATTCCGCCCACTTTGGCCGCAGCGAGAAATACATACTCCGGTTTTTCCT 35615 Query 151024 TTTCGAAAAATGCGGTCACTTCTTGTTGATTGGTCAAATCGAGTTCTTTAGATGATCGGG 151083 |||| || || | | ||| | ||||||||| | || || | |||| |||| Sbjct 35614 TTTCAAAGAAATCACTTACTGCCTGTTGATTGCGGAGGTCCAGCTGGGCTGATGTCCGGG 35555 Query 151084 TGATGATATTTGTATAACCCTCTTTCTGTAGCAGTCTTACCAGCGAGCTTCCAACCATTC 151143 | | | ||| || |||| ||||| || || || | || || ||||||| Sbjct 35554 TCAAAAGATTATTAAAACCTTCTTTTTGCAGTTTTCGGTAAATCGCAGAACCCACCATTC 35495 Query 151144 CAGTATGACCAGCCACGTAGATTTTAGAGTGCTTATCCA 151182 || ||||| || || || ||||| ||||| || |||| Sbjct 35494 CACGGTGACCGGCAACATATATTTTTGAGTGTTTTTCCA 35456 >seq915 Length=13476 Score = 95.1 bits (104), Expect = 3e-14 Identities = 342/524 (65%), Gaps = 16/524 (3%) Strand=Plus/Plus Query 230095 TTTGATGCCATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGG 230154 ||| ||||||| || | ||| || || | || ||||| |||||||| || |||| Sbjct 48 TTTAATGCCATCGAGACCATTCCATGTGTAAAGAAGAAGGCTGAGTGGGCTATGAGATGG 107 Query 230155 CT-AGAACCTGGTAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTAT 230213 | | | || || || ||||| |||||| | ||||||| | ||| || ||||| Sbjct 108 ATTACCAACTCC-AAGTCATTTGCTGAGCGTTTGGTCGCCTTTGCAGCTGTAGAGGGTAT 166 Query 230214 TCTGTTTTCCGGG--AGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCT 230271 || ||||| | | || |||||| ||||||||||||| ||| || ||||||| Sbjct 167 -CT-TTTTCAGTGGTAGCTTCTGCTCCATCTTTTGGCTCAAGAAGCGTGGCTTGATGCCC 224 Query 230272 GGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGC 230331 || | | ||||||||| |||||||||| ||||||||||| || | || | | Sbjct 225 GGATTGACATTCTCTAACGAGCTCATCAGTCGTGACGAGGGTCTTCACTGTGACTTTGCC 284 Query 230332 GAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCAT-TCGAGACGGTCAAACAAATCAT 230390 | | || ||||| ||| || | || | | || || | ||||| Sbjct 285 TGTTTGCTCTACAGCAAGCTTGTCAACCGTCT-CGATGCCAACACTCTCGAGTCCATCAT 343 Query 230391 TACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTAT---TCCATGTCG-CC 230446 | || || || || || |||||| ||| | || | || ||| ||||| | Sbjct 344 TCGCGATGCTGTAGAGTGTGAGAAGGAG----TTTATCACCCAATCACTCCCTGTCGATC 399 Query 230447 TTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTT 230506 | |||||||||||| | ||| |||||||||||| || ||||| || | Sbjct 400 TCATTGGCATGAACAGTCGCTCCATGTCACAGTACATCGAGTTTTGTGCCGATCGTCTCC 459 Query 230507 TTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGC 230566 | |||| || || ||| |||| | |||||||||| ||||| || | | |||||| Sbjct 460 TCCTTGCCCTCGGATACAAGAAGATCTACAACTCTACCAACCCATTCGACTGGATGGAGA 519 Query 230567 TCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTC 230610 | || ||||| | ||||||||||| ||||| || |||||| Sbjct 520 TGATCTCGCTCATTCGCAAGACCAACTTTTTCGAGAACCGTGTC 563 >seq1600 Length=8420 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||| Sbjct 5990 TTGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGA 6049 Query 165768 GCCCCACGATGGGC 165781 ||||| | ||||| Sbjct 6050 GCCCCCCATTGGGC 6063 >seq1037 Length=10012 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||| Sbjct 7022 TTGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGA 7081 Query 165768 GCCCCACGATGGGC 165781 ||||| | ||||| Sbjct 7082 GCCCCCCATTGGGC 7095 >seq747 Length=11648 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||| Sbjct 6718 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 6777 Query 165769 CCCCACGATGGGC 165781 |||| | ||||| Sbjct 6778 CCCCCCATTGGGC 6790 >seq1592 Length=14346 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| Sbjct 11154 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 11213 Query 165770 CCCACGATGGGC 165781 ||| | ||||| Sbjct 11214 CCCCCATTGGGC 11225 >seq826 Length=19116 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| Sbjct 11542 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 11483 Query 165770 CCCACGATGGGC 165781 ||| | ||||| Sbjct 11482 CCCCCATTGGGC 11471 >seq401 Length=11145 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| Sbjct 269 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 210 Query 165770 CCCACGATGGGC 165781 ||| | ||||| Sbjct 209 CCCCCATTGGGC 198 >seq52 Length=11045 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| Sbjct 6942 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAGC 7001 Query 165770 CCCACGATGGGC 165781 ||| | ||||| Sbjct 7002 CCCCCATTGGGC 7013 >seq1719 Length=44522 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/170 (72%), Gaps = 8/170 (5%) Strand=Plus/Minus Query 41244 GAGAAATTTTACTTTACACCAAGTAGCAATCCG-TATGAAGTTTTTGAAACAAAATTCGG 41302 ||||||||||| ||||| ||| | | | | ||| |||| ||| |||| || | | Sbjct 43340 GAGAAATTTTATTTTACCCCAGGC-GATTTAGGCTATAAAGTATTTAAAACCAAGTATGC 43282 Query 41303 GAAAATGGGTGTGCTGATTTGCTGGGATCAGTGGTTCTCTGAAGCAGCGAAATGTCTG-- 41360 ||||| |||||||||||||||||||| ||||||| | |||||||| | | ||| Sbjct 43281 CAAAATTGGTGTGCTGATTTGCTGGGACCAGTGGTATCCCGAAGCAGC---ACGGCTGAC 43225 Query 41361 -GCTCTAGAAGGCGCTGATTTTATTGTATACCCCACCGCCATCGGCTCGG 41409 || || || || |||||| | || ||||| ||||| ||||||| || Sbjct 43224 CGCGCTGATGGGTGCAGATTTTCTGGTTTACCCGACCGCAATCGGCTGGG 43175 >seq344 Length=3983 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || ||||| |||||||||||||||||||| || ||||||| || ||||||| ||||||| Sbjct 1123 CTAGCCCGGTTAGCTCAGTCGGTAGAGCGCGAGGCTTTTAACCTCGTGGTCGGGGGTTCG 1064 Query 165767 AGCCCC 165772 |||||| Sbjct 1063 AGCCCC 1058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057642628802660