Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_000924.1 Length=61670 Score E Sequences producing significant alignments: (Bits) Value seq3933 2403 0.0 seq4011 1956 0.0 seq2342 1783 0.0 seq10411 197 5e-46 seq4422 150 7e-32 seq3951 98.7 4e-16 >seq3933 Length=4962 Score = 2403 bits (2664), Expect = 0.0 Identities = 1385/1419 (98%), Gaps = 1/1419 (0%) Strand=Plus/Minus Query 6257 GTACTGTTTTCCCCAGGCCAGAGCCTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAAC 6316 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 4536 GTACTGTTTTCCCCAGGCCAGCGCCTTAGCATTAACTTCCGGAGCCACACCGGTGCAAAC 4477 Query 6317 CTCAGCCAGCAGGGTGTGGAAGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGATCG 6376 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4476 CTCAGCCAGCAGGGTGTGGAAGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGAGCG 4417 Query 6377 GGGTTTTGCTATTACGTTGTGAATTTCTGAAGCTGTGATGACGCCGAGCCGTAATTTGTG 6436 ||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 4416 GGGCTTTGCTATCACGTTGTGAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTG 4357 Query 6437 CCACGCATCATCTCCCTGTTCGACAGCTCTCACGTCGATCCCGGTACGCTGCAGGATAAT 6496 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4356 CCATGCATCATCCCCCTGTTCGACAGCTCTCACGTCGATCCCGGTACGCTGCAGGATAAT 4297 Query 6497 GTCCGGTGTCATGCTGCCACCTTCTGTTCAGTGGCTTTTTGTTTCAGGAATCCAAGAGCT 6556 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 4296 GTCCGGTGTCATGCTGCCACCTTCTGCTCAGTGGCTTTCTGTTTCAGGAATCCAAGAGCT 4237 Query 6557 TTTACTGCTTCGGCCTGTGTCAGTTCTGACGATGCACGAATGTCGCGGCGAAATATCTGG 6616 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 4236 TTCACTGCTTCGGCCTGTGTCAGTTCTGACGATGCGCGAATGTCGCGGCGAAATATCTGG 4177 Query 6617 GAACAGAGCGGCAATAAGTCGTCATCCCATGTTTTATCCAGGGCGATCAGCAGAGTGTTA 6676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4176 GAACAGAGCGGCAATAAGTCGTCATCCCATGTTTTATCCAGGGCGATCAGCAGAGTGTTA 4117 Query 6677 ATTTCCTGCATGGTTTCATCGTTAACCGGAGTGATGTCGCGTTCCGGCTGACGTTCTGCA 6736 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4116 ATCTCCTGCATGGTTTCATCGTTAACCGGAGTGATGTCGCGTTCCGGCTGACGTTCTGCA 4057 Query 6737 GTGTATGCGGTATTTTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAAT 6796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4056 GTGTATGCGGTATTTTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAAT 3997 Query 6797 CCGAAGGCGAGACGGGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGC 6856 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3996 CCGAAGGCCAGACGGGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGC 3937 Query 6857 GACTGCCACGGCCCCGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCAT 6916 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3936 GACTGCCACGGTCCGGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCAT 3877 Query 6917 TCATCCATCCACTCGGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCAT 6976 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3876 TCATCCATCCACTCGGTAACGCAGATCGGATGATTGCGGTCCTTGCGGTAAATCCGGCAT 3817 Query 6977 GTGCAGGATTCATTGTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCGTTGATG 7036 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 3816 GTGCAGGATTCATTGTCCTGCTCAAAGTCCATACCATCAAACTGCTGGTTTTCATTGATG 3757 Query 7037 ATGCGGGACCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAG 7096 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3756 ATGCGGGACCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAG 3697 Query 7097 GCGTAAATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAGCAATGCG 7156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3696 GCGTAAATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAGCAATGCG 3637 Query 7157 ATGAACTGCGCATCGCTGGCATCACCTTTAAATGCCGTCTGGCGAAGAGTGGTGATCAGT 7216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3636 ATGAACTGCGCATCGCTGGCATCGCCTTTAAATGCCGTCTGGCGAAGAGTGGTGATCAGT 3577 Query 7217 TCCTGTGGGTCGACAGAATCCATGCCGACACGTTCAGCCAGCTTCCCAGCCAGCGTTGCG 7276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3576 TCCTGTGGGTCGACAGAATCCATGCCGACACGTTCAGCCAGCTTCCCAGCCAGCGTTGCG 3517 Query 7277 AGTGCTGTACTCATCCGTTTTATACCTCTGAATCAATATCAACCTGGTGGTGAGCAATGG 7336 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3516 AGTGCTGTACTCATCCGTTTTATACCTCTGAATCAATATCAACCTGATGGTGAGCAATGG 3457 Query 7337 TTTCAACCATGTACCGGATGTGTTCTGCCATGCGTTCCTGAAACTCAACATCGTCATCAA 7396 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3456 TTTCAACCATGTACCGGATGTGTTCTGCCATGCGCTCCTGAAACTCAACATCGTCATCAA 3397 Query 7397 ACGCACGGGTAATGGCTTTTTTGCTGGCCCCGTGGCGTTGCAAATGATCGATGCATAGCG 7456 | |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| Sbjct 3396 ATGCACGGGTAATGGCTTTTTTGCTGGCCCCGCAGCGTTGTAAATGATCGATGCAGAGCG 3337 Query 7457 ATTCAAACAGGTGCTGGGGCAGGCCTTTTTCCATGTCGTCTGCCAGTTCTGCCTCTTTCT 7516 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3336 ATTCAAACAAATGCTGGGGCAGGCCTTTGTCCATGTCGTCTGCCAGTTCTGCCTCTTTCT 3277 Query 7517 CTTCACGGGCGATCTGCTGGTAGTGACGCGCCCAGCTCTGAGCCTCAAGACGATCCTGAA 7576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3276 CTTCACGGGCGATCTGCTGGTAGTGACGCGCCCAGCTCTGAGCCTCAAGACGATCCTGAA 3217 Query 7577 TGTAATAAGCGTTCATGGCTGAACTCCTGAAAATGGCTGTGAAAATATCGCCCGCGAAAT 7636 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3216 TGTAATAAGCGTTCATGGCTGAACTCCTGAAAATGGCTGTGAAAATATCGCCCGCGAAAT 3157 Query 7637 GCCAGGCTGATTAGGAAAACAGGAAA-TGGGGTTAGTGA 7674 ||||||||||||||||||||| |||| ||||||||||| Sbjct 3156 GCCAGGCTGATTAGGAAAACAAGAAAGGGGGGTTAGTGA 3118 Score = 621 bits (688), Expect = 1e-173 Identities = 364/377 (97%), Gaps = 0/377 (0%) Strand=Plus/Minus Query 5802 TACCCGGATATTATCGTGAGGATGCTTCATTACCATTGCTCCCCATATACAAAACCAATT 5861 ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| Sbjct 4962 TACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATT 4903 Query 5862 TCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCC 5921 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4902 TCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCC 4843 Query 5922 ATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGG 5981 ||||| ||||||| |||||||| |||||||||||||||||||||||||||||| || ||| Sbjct 4842 ATGTAATTTTCATCCCGCTCAACCACGACATAATGCAGGCCTTCACGCTTCATTCGTGGG 4783 Query 5982 TCATAGTTGGCAAAGTACCAGGCATCTTTTCGTGTCACCCACATGCTGTACTGCACCTGG 6041 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 4782 TCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCACCTGG 4723 Query 6042 GCCATGTAAGCCGATTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGG 6101 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 4722 GCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGG 4663 Query 6102 GAGGTAAACGGGCATTTCAGCTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAGAG 6161 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 4662 GAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAGAG 4603 Query 6162 CAGGCGGTGCGCATACT 6178 ||||||||||||||||| Sbjct 4602 CAGGCGGTGCGCATACT 4586 >seq4011 Length=1784 Score = 1956 bits (2168), Expect = 0.0 Identities = 1167/1222 (95%), Gaps = 0/1222 (0%) Strand=Plus/Minus Query 14028 ACACAAAAGACACTATTACaaaagaaaaaagaaaaGATTATTCGTCCGAGAATTCTGGCG 14087 |||||||||||| | |||||||| || | |||| || ||||||||||||||||| || Sbjct 1222 ACACAAAAGACAAACTAACAAAAGACAATATAAAACCTTTTTCGTCCGAGAATTCTGACG 1163 Query 14088 AATCCTCTGACCAGCCAGAAAACGATCTTTCTGTGGTTAAACCGGATGCTGCAATTCAGA 14147 ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| Sbjct 1162 AATCCTCTGACCAGCCAGAAAACGATCTTCCTGTGATGAAACCGGATGCTGCAATTCAGA 1103 Query 14148 GCGGCAGCAAGTGGGGAACAGCAGAAGACCTGACCGCCGCAGAGTGGATGTTTGACATGG 14207 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1102 GCGGCAGCAAGTGGGGGACAGCAGAAGACCTGACCGCCGCAGAGTGGATGTTTGACATGG 1043 Query 14208 TGAAGACCATCGCACCATCAGCCAGAAAACCGAATTTTGCAGGGTGGGCTAACGATATCC 14267 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1042 TGAAGACCATCGCGCCATCAGCCAGAAAACCGAATTTTGCAGGGTGGGCTAACGATATCC 983 Query 14268 GCCTGATGCGTGAACGTGACGGACGTAACCACCGCGACATGTGCGTGCTGTTCCGCTGGG 14327 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 982 GCCTGATGCGTGAACGTGATGGACGTAACCACCGCGACATGTGCGTGCTGTTCCGCTGGG 923 Query 14328 CATGCCAGGACAACTTCTGGTCCGGTAACGTGCTAAGTCCGGCCAAACTCCGCGACAAGT 14387 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 922 CATGCCAGGACAACTTCTGGTCCGGTAACGTGCTGAGTCCGGCTAAACTCCGCGACAAGT 863 Query 14388 GGACCCAACTCGAAATCAACCGTAACAAGCAACAGGCTGGCGTGACAGCTGGAAAACCAA 14447 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 862 GGACCCAGCTCGAAATCAACCGTAACAAGCAACAGGCTGGCGTGACAGCCAGAAAACCAA 803 Query 14448 AACTCGACCTGACAAACACTGACTGGATTTACGGGGTGGATTTATGAAAAACATCGCCGC 14507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 AACTCGACCTGACAAACACTGACTGGATTTACGGGGTGGATTTATGAAAAACATCGCCGC 743 Query 14508 ACAGATGGTTAACTTTGACCGTGAGCAGATGCGTCGGATCACCAACAACATGCCGGAACA 14567 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 742 ACAGATGGTTAACTTTGACCGTGAGCAGATGCGTCGGATCGCCAACAACATGCCGGAACA 683 Query 14568 GTACGACGAAAAGCCGCAGGTACAACAGGTAGCGCAGATCATCAACGGTGTGTTCAGCCA 14627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 682 GTACGACGAAAAGCCGCAGGTACAACAGGTAGCGCAGATCATCAACGGTGTGTTCAGCCA 623 Query 14628 GTTACTGGCAACTTTCCCGGCGAGTCTGGCTAACCGGGACCAGAACGAACTGAATGAAAT 14687 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct 622 GTTACTGGCAACTTTCCCGGCGAGCCTGGCTAACCGTGACCAGAATGAACTGAACGAAAT 563 Query 14688 CCGCCGCCAGTGGGTTCTGGCTTTCCGGGAAAACGGGATCACCTCGATGGAACAGGTTAA 14747 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 562 CCGCCGCCAGTGGGTTCTGGCTTTCCGGGAAAACGGGATCACCACAATGGAACAGGTTAA 503 Query 14748 CGCAGGAATGCGCGTAGCCCGTCGGCAGAATCGACCATTTCTTCCATCACCCGGGCAGTT 14807 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 502 CGCAGGAATGCGCGTAGCCCGTCGGCAGAATCGACCATTCCTGCCATCACCCGGGCAGTT 443 Query 14808 TGTTGCATGGTGCCGGGAAGAAGCATCCGTTATCGCCGGACTGCCAAACGTCAGCGAGCT 14867 ||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 442 TGTCGCCTGGTGCCGGGAAGAAGCATCCGTTAACGCCGGGCTGCCAAACGTCAGCGAGCT 383 Query 14868 GGTTGATATGGTTTACGAGTATTGCCGGAAGCGAGGCCTGTATCCGGATGCAGAGTCTTA 14927 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 382 GGTTGATATGGTTTACGAGTATTGCCGGAAGCGTGGCCTGTATCCGGATGCAGAGTCTTA 323 Query 14928 TCCGTGGAAATCGAACGCGCACTACTGGCTGGTTACCAACCTGTACCAGAACATGCGGGC 14987 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 322 TCCGTGGAAATCGAACGCGCATTACTGGCTGGTTACCAACCTGTACCAGAACATGCGGGC 263 Query 14988 CAATGCGCTGACTGACGCGGAATTACGACGCAAGGCTGCCGATGAACTGACCTGTATGAC 15047 ||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 262 CAATGCGCTTACTGATGCGGAATTACGGCGCAAGGCTGCCGATGAACTGTCCTGTATGAC 203 Query 15048 AGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTCATGGG 15107 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 202 CGCGCGAATTAACCGTGGTGAGGCGATACCTGAACCAGTAAAACAGCTTCCTGTCATGGG 143 Query 15108 CGGCAGACCTCTAAATCGTGTTCAGGCGCTGGCGAAGATCGCAGAAATTAAAGCTAAGTT 15167 ||| |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct 142 CGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTT 83 Query 15168 CGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACG 15227 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 82 TGGGCTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTTATTACCTGGGGACG 23 Query 15228 CATAATAGCTTCTGTGCGCCGG 15249 ||||| || |||||||||| || Sbjct 22 CATAAGAGTTTCTGTGCGCAGG 1 >seq2342 Length=4104 Score = 1783 bits (1976), Expect = 0.0 Identities = 1050/1091 (96%), Gaps = 0/1091 (0%) Strand=Plus/Plus Query 4860 TAATTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCCTCCTGGC 4919 || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 3014 TAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCTTGCTGGC 3073 Query 4920 AACTTGCACAAGTCCGACAACCCTGAACGGCCAGGCGTCTTCGCTCATCTATGGGATCGC 4979 |||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct 3074 AACTGGCACAAGTCCGACAACCCTGAACGGCCAGTCGTCTTCGTTCATCTATCGGATCGC 3133 Query 4980 CACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTG 5039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3134 CACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTG 3193 Query 5040 CTGTGTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATGAGGTCTGCCATCTTTC 5099 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 3194 CTGTGTTGCGCTGTAATTCTTCAATTTCTGATGCTGAATCAATTATGTCTGCCATCTTTC 3253 Query 5100 ATTAATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAG 5159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3254 ATTAATCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAG 3313 Query 5160 CCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCACCGTTCCTTAAAGACGCCGTTTAA 5219 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3314 CCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCACCGTTCCTTAAAGACGCCGTTCAA 3373 Query 5220 CATGCCGATCGCCAGACTTAAATGAGTCGGTGTGAATCCCATTAGCGTTACCGTTTCGCG 5279 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 3374 CATGCCGATCGCCAGGCTTAAATGAGTCGGTGTGAATCCCATCAGCGTTACCGTTTCGCG 3433 Query 5280 GTGCTTCTTCAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACTGCTGTCT 5339 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3434 GTGCTTCTTTAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACTGCTGTCT 3493 Query 5340 GGCTTTTTTGATTTCAGAATTAGCCTGACGGGCAATGCTGCGAAGGGCGTTTTCCTGCTG 5399 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3494 GGCTTTTTTGATTTCAGAATTAGCCTGACGGGCAATGCTGCGAAGGGCGTTTTCTTGCTG 3553 Query 5400 AGGTGTCATTGAACAAGTCCCATGTCGGCAAGCATAAGCACACAGAATATGAAGCCTGCT 5459 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 3554 AGGTGTCATTGAACAAGCCCCATGTCGGCAAGCATAAGCACACAGAATATGAAGCCCGCT 3613 Query 5460 GCCAGAAAAATGCATTCTGTTGTTGTCATGCCGGGTCTCTCTCGTTTGCTTCTGCTTTCG 5519 ||||||||||||||||| || |||||||| || |||||||||| | |||||||||||||| Sbjct 3614 GCCAGAAAAATGCATTCAGTGGTTGTCATACCTGGTCTCTCTCATCTGCTTCTGCTTTCG 3673 Query 5520 CCGCCATCATTTCCAGCTTTTGTGAAAGGGATGTGGCTAACGTATGAAATTCTTCGTCTG 5579 || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3674 CCACCATCATTTCCAGCTTTTGTGAAAGGGATGCGGCTAACGTATGAAATTCTTCGTCTG 3733 Query 5580 TTTCTACTGGTATTGGCACAAACCTGACTCCAATTTGAGCGAGGCTATGTGCCATCCCGA 5639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3734 TTTCTACTGGTATTGGCACAAACCTGACTCCAATTTGAGCGAGGCTATGTGCCATCTCGA 3793 Query 5640 TACTCGTTCTTAATTCAACAGGAGATGCTTTGTGCATACAGCCCCTCGTTTATTATTTAT 5699 ||||||||||||| ||||| |||||||||||||||||||||| || |||||||||||||| Sbjct 3794 TACTCGTTCTTAACTCAACGGGAGATGCTTTGTGCATACAGCTCCCCGTTTATTATTTAT 3853 Query 5700 CTCTTCAGCCAGCCGCTGTGCTTTCAGTGGATTTCGGATAACAGAAAGGCCGGGAAATAC 5759 ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 3854 CTCCTCAGCCAGCCGCTGTGCTTTCAGGGGATTTCTGATAACAGAAAGGCCGGGAAATAC 3913 Query 5760 CCAGCCTCGCTTTGTAACGGAGTAGACGAAAGTGATCGTGCCTACCCGGATATTATCGTG 5819 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 3914 CCAGCCTCGCTTTGTAATGGAGTAGACGAAAGTGATCGCGCCTACCCGGATATTATCGTG 3973 Query 5820 AGGATGCTTCATTACCATTGCTCCCCATATACAAAACCAATTTCAGCCAGTGCCTCGTCC 5879 ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3974 AGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCC 4033 Query 5880 ATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGC 5939 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 4034 ATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTAATTTTCATCCCGC 4093 Query 5940 TCAATCACGAC 5950 |||| |||||| Sbjct 4094 TCAACCACGAC 4104 Score = 223 bits (246), Expect = 1e-53 Identities = 137/146 (94%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 60184 TAATTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCCTCCTGGC 60243 || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 3014 TAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGCTCCAGATCTTGCTGGC 3073 Query 60244 AACTTGCACAAGTCCGACAACCCTGAACGGCCAGGCGTCTTCGCTCATCTATGGGATCGC 60303 |||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct 3074 AACTGGCACAAGTCCGACAACCCTGAACGGCCAGTCGTCTTCGTTCATCTATCGGATCGC 3133 Query 60304 CACACTCGCAACAATGAGTAGCAGAT 60329 ||||||| ||||||||||| |||||| Sbjct 3134 CACACTCACAACAATGAGTGGCAGAT 3159 Score = 122 bits (134), Expect = 3e-23 Identities = 67/67 (100%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1696 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATATTGGT 1755 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1789 AAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATATTGGT 1848 Query 1756 TACGTCT 1762 ||||||| Sbjct 1849 TACGTCT 1855 Score = 118 bits (130), Expect = 4e-22 Identities = 84/95 (88%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 2063 ATCATCTCCATAAAACAAAACTCGCCGTAGCGAGTTCAGATAAAAGAAATCCCCGCGAGT 2122 ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| Sbjct 1974 ATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAAGAAATCCTCGTCAGT 2033 Query 2123 GCGAGGATTGTTATTCATTGCCGATATTCACCTTT 2157 ||||||| || | |||||||| | ||| ||| ||| Sbjct 2034 GCGAGGA-TGCTGTTCATTGCTGCTATACACTTTT 2067 >seq10411 Length=590 Score = 197 bits (218), Expect = 5e-46 Identities = 166/202 (82%), Gaps = 5/202 (2%) Strand=Plus/Plus Query 28223 CTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGT 28282 ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2 CTGTCCAATTCCCGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGTTACTGCTGT 61 Query 28283 CTGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGC 28342 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 62 CGGTTTGTTTCCAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCATTGCCAGAGC 121 Query 28343 AGTAGCGAGTAGCAtttttttCATGGTGTTATTCCCGATGC-TTTTTGAAGTTCGCAGAA 28401 | || | | |||||||||||| | |||| | ||| || || || |||||| Sbjct 122 GGCAGAAAACAACATTTTTTTCATCTTATTATCC----TGCATTGTTAAAAACGGCAGAA 177 Query 28402 TCGTATGTGTAGAAAATTAAAC 28423 || |||||| | |||||||| Sbjct 178 TCCTATGTGACAACAATTAAAC 199 Score = 138 bits (152), Expect = 4e-28 Identities = 145/183 (79%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 28479 AGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAA 28538 || |||| || |||||| ||||||||| |||||| ||| || ||||| ||||||||| Sbjct 328 AGCTGCGCTGTATCGTCGCCGTATTCCCGCATTAACCATGACCGTAGCCC-GACGGGGAA 386 Query 28539 CTTCT-CTGCGGGAGTGTGCGGGGATAATCAAAAACGATGCACACCGGGTTTTCTCATTT 28597 | || ||||| ||||||||||| ||||||||||||||||||||||||||||| | | Sbjct 387 TTCCTTCTGCGTGAGTGTGCGGGAATAATCAAAAACGATGCACACCGGGTTTT-ACTGTG 445 Query 28598 TTCACGAGATGGGAGCGATTTCCCGCGAAGCCGCCTGTCCGGTGCGGTGGTGGAAGAAAC 28657 | || ||| | || | || ||| | || ||| | ||||||||| ||||||||||||| Sbjct 446 CTGAC-AGA-CGCAG-GGTTACCCTCATAGTCGCTTTTCCGGTGCGATGGTGGAAGAAAC 502 Query 28658 CGG 28660 ||| Sbjct 503 CGG 505 >seq4422 Length=2403 Score = 150 bits (166), Expect = 7e-32 Identities = 155/199 (78%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 15237 TTCTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAATCAGGCC 15296 |||||||||| ||||||||| ||| |||||| | ||||||||| ||||||||||||| Sbjct 1 TTCTGTGCGCAGGACGTTGCTGCGGCAACAGGTGTGACAGTAACCTGCATAAATCAGGCA 60 Query 15297 GCAGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGGTG 15356 |||||||||||||| || ||||| | ||||| || || |||||||||||||||||| | Sbjct 61 GCAGCTAAAATGGCGCGTGCAGGAATCCTGGTCATTGATGGTAAGGTCTGGCGAACGTTT 120 Query 15357 TATTACCGGTTTGCTACCAGGGAAGA-ACGGGAAGGAAAGATGAGCACGAACCTGATTTT 15415 ||| ||||| ||||| ||| || | || || ||| |||| | ||| | || ||| Sbjct 121 GTTTAACGGTTAGCTACTCAGGATGATAGGGCGCGGCAAG-TGAGTATGAAGCGGA-TTT 178 Query 15416 TAAGGAGTGTCGCCAGAGT 15434 | |||| || | |||||| Sbjct 179 TCAGGAATGCCATCAGAGT 197 >seq3951 Length=514 Score = 98.7 bits (108), Expect = 4e-16 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 27646 AACCATTACCGTGACAACGCGCTCACCTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAG 27705 || ||||||||||| ||||| | ||||||||||| |||||||| ||||| |||||||| Sbjct 421 AATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAA 480 Query 27706 CTGGAACAGGCGAATGCCACCATTACTGACATGC 27739 ||| | | |||||| || | ||||||||||||| Sbjct 481 CTGAAGCTGGCGAACGCGGCAATTACTGACATGC 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197191059141888