Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_001396.1 Length=7308 Score E Sequences producing significant alignments: (Bits) Value seq2313 80.6 1e-11 >seq2313 Length=1558 Score = 80.6 bits (88), Expect = 1e-11 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 4959 CATCAACAGTGACCATTCCCGTGCGATCGCGCATGTCAGCGCCCAATACCGCATATCGCA 5018 ||||| ||| ||||||||| ||||| ||| ||||||| ||| | ||||||| Sbjct 320 CATCATCAGCCGCCATTCCCGCGCGATGTTGCAGGTCAGCGACCACCAGGCCATATCGAC 379 Query 5019 CGGTTCGATGTCGTAATTCTCCGGGGTGAAGAACCGGTGCCCCTGAAAACCAAAACCGGC 5078 || || | | ||| ||| || ||||| | || ||||||| ||||||||||| Sbjct 380 AGGCTCAAGGCTGTAGCCCTCAGGTGTGAACATGTGGCCGGCCTGAAAGCCAAAACCGGC 439 Query 5079 CCAAGGGCCGGTCAGGTCTACGCGATCGT 5107 |||||||||||| |||| | ||| |||| Sbjct 440 CCAAGGGCCGGTTAGGTTGATGCGGTCGT 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23266896699456