Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq3006 129 1e-25 seq12163 114 3e-21 >seq3006 Length=629 Score = 129 bits (142), Expect = 1e-25 Identities = 191/266 (72%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 18303 ATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAATGTCGGGGTGAACGGTGTTACC 18362 ||||| || |||| ||||||||||| |||||||||| || | || ||| || ||| Sbjct 6 ATCGATGAGCAGCAAGGCTGGCATAAGTCGCTGTCCAACGTGGCCGTAGCCGGCGTGACC 65 Query 18363 GGCATCAGC--GCATCTGTATTCTGGGATTTGCAGGAGTCCGGC-ACCGATGCTGACCTG 18419 ||||||||| | | | || ||||| ||||||| |||||| ||||| || | | || Sbjct 66 GGCATCAGCCGGGACGTCCAT--TGGGACCTGCAGGA-TCCGGCGACCGACGCCGGCATG 122 Query 18420 CTTAACGAGTCAGGCGTCACTACGCTGATTCGCCGCGACGGTTTCCGCTTCTGGGGTAAC 18479 || || | | | |||| |||||||| | | |||| | | |||||||| Sbjct 123 CTCAATGCCGCCGATATCACCACGCTGATCAACTCCAACGGGTACAAGTTCTGGGGATCG 182 Query 18480 CGTACCTGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTC 18539 || |||||| ||||| |||||||| ||| || | || ||||||||| |||||| || Sbjct 183 CGCACCTGCAGCGATGAGCCGCTGTTTGCCTTCGAGACCTCCACCCGCACGGCGCAGATC 242 Query 18540 GTGGCCGACACGATGGCTGAGGCGCA 18565 |||||||||| || || |||||||| Sbjct 243 CTGGCCGACACCATCGCCGAGGCGCA 268 >seq12163 Length=619 Score = 114 bits (126), Expect = 3e-21 Identities = 206/293 (70%), Gaps = 11/293 (4%) Strand=Plus/Plus Query 1636 GCAAAGTCCATGCCTTTCCACTGGTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACC 1695 || ||||||||||| || ||||||||||||| || | | ||| |||||||||| ||| Sbjct 7 GCGAAGTCCATGCCCTTGAACTGGTGACGCTCCAGCACGCGGAACTTGCCACCGGGCACT 66 Query 1696 ACCGGCGGTGCCAGTACCACGCATCCGGCGCTGTCGCCACGGTGTGACGGGTCGTAACCA 1755 ||||| |||| | |||| |||||||||||||| | | ||||||||| ||| Sbjct 67 TGGGGCGGCGCCACAATCACGATGCCGGCGCTGTCGCCCGTCTCGGCCGGGTCGTACCCA 126 Query 1756 ATCCATACCGGGCGGGAGCCGAACG---GATTGGCGGCAAACGGCGCA--TAGTCTTCCC 1810 ||||| |||| |||| ||| | | | ||||| || ||| | | | | ||| Sbjct 127 ATCCACACCGCGCGGTCGCCATATGGGCGCATGGCG--AAGGGGCTGAACTCGCCGGCCC 184 Query 1811 A-TTCTTCCAGCGTGTCGACCATGCAGCGTTGCAGC-TCCTCGAACGGGAACACCGATGC 1868 | | | ||||| |||| ||| ||| | |||||| || || | ||||||||| || Sbjct 185 ACTCCACCCAGC-TGTCCACCTGGCACGGCTGCAGCATCGTC-AGCGGGAACACGCTGGC 242 Query 1869 CTTGTCGTCAACAAATTCACACATGAACAGGTTTTTAAAATCGTCGGCGCTGT 1921 ||||||| || || || ||||| | |||||| || || |||||||||| Sbjct 243 GCTGTCGTCCACGAACTCGCACATCAGCAGGTTGGCGAATTCCTCGGCGCTGT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107358936745620