Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq444 105 1e-17 seq1158 96.9 5e-15 >seq444 Length=38654 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| ||| | || || || |||||||| ||||| || | ||| | || | Sbjct 4814 ACAATGCAAATCTTTGTTAAAACTCTGACAGGCAAGACTATTACCTTGGAGGTCGAGGGT 4873 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||||| || || | || || || ||||| || || || || |||||||| Sbjct 4874 TCCGATACTATCGAGAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCACCTGAC 4933 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||| | || || ||||| || || ||| | |||||| |||| || | ||||| Sbjct 4934 CAACAACGTCTCATCTTTGCCGGCAAGCAACTTGAGGATGGTCGTACTCTCTCCGATTAC 4993 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || ||| | || |||||| | ||| | || |||||||| Sbjct 4994 AACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCCGTCTCCGTGGTGGTAT 5046 >seq1158 Length=25781 Score = 96.9 bits (106), Expect = 5e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || ||||||||||| || ||||| ||||| ||||||||| | || || || || || || Sbjct 9395 AAGATTCAAGATAAGGAGGGTATCCCACCCGATCAACAACGTCTCATCTTCGCCGGCAAG 9336 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | |||||| |||| || | ||||| || |||||||| || ||||| | || Sbjct 9335 CAACTCGAGGATGGTCGCACTCTCTCCGATTACAACATTCAAAAGGAGTCAACCCTTCAC 9276 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| | ||| | || |||||||| Sbjct 9275 TTGGTGCTCCGTCTCCGTGGTGGTAT 9250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755329631097600