Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq11800 102 3e-17 >seq11800 Length=371 Score = 102 bits (112), Expect = 3e-17 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 48943 CCGGTGCTCCCGCTCTGCCAGCTCAACCGCG-GATGTGAGTCTCGCCCGGATAAGCGCCC 49001 |||||| || |||| | ||||||||||||| | || || | || | || |||||||| Sbjct 154 CCGGTGATCGCGCTGTCCCAGCTCAACCGCTCGCTG-GAAACGCGTACCGACAAGCGCCC 96 Query 49002 GGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAAGACGCGGACATCGTGATGTT 49061 |||| | |||||| ||||| |||||||| |||||||| ||||||||||| | |||| Sbjct 95 GGTGATGGCCGACCTTCGCGAATCCGGCGCTATCGAGCAGGACGCGGACATGATCGTGTT 36 Query 49062 CGTGTACCGCGATGA 49076 | | |||||||| || Sbjct 35 CATCTACCGCGACGA 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180412925799792