Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2491 141 2e-28 >seq2491 Length=10632 Score = 141 bits (156), Expect = 2e-28 Identities = 290/431 (67%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 |||||| || | ||| || | || |||| | | ||||| |||| || ||||| Sbjct 5427 CTGGACAGCACCATTATTTATGACAGGGATTCAGGATTCGATTATTTTGGGTTTAAAACC 5486 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || || ||||| ||||| || ||||| || || | || || ||||| || || || Sbjct 5487 CTTGAAAAATCCTATCTGCTGAAAATAGAAGGACAAATTGTAGAACGCCCGCAACATTTG 5546 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTAC 248961 || ||||| || || || ||||||||||| || || || || || | | | | ||||| Sbjct 5547 TTTATGCGTGTTGCCGTAGGGATTCACAAAGAAGATATTGAAAGTGCGATTGCAACGTAT 5606 Query 248962 ACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACC 249021 | | |||||||| |||||| | || ||||| || || || | || || || | |||| Sbjct 5607 AACCTGATGAGTGAGCGCTGGTTTACGCATGCAACCCCAACTTTATTTAATGCAGCTACC 5666 Query 249022 GTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGC 249081 || ||| || || |||||| | || ||||||| |||||| | | || || Sbjct 5667 CCTAAACCTCAAATGTCTTCCTGCTTTTTACTGACCATGCAGGACGACAGTATTGAAGGA 5726 Query 249082 ATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTC 249141 ||||| || || | ||||| || || || ||||| || ||| || || || ||| | Sbjct 5727 ATTTACGATACTTTAAAACAAACCGCTAAAATTTCACAAAGCGCAGGTGGTATTGGTTTA 5786 Query 249142 TCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGAT 249201 | || |||||||| || | ||| || || || || ||||| ||| ||| || Sbjct 5787 AGCATCCATAACATCCGTGCCACGGGATCTTATATTGGTGGAACAAACGGGACCAGCAAT 5846 Query 249202 GGTATCGTACC 249212 || || ||||| Sbjct 5847 GGGATTGTACC 5857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073582295368576